Article
Characterization of a SPM‑1 metallo‑beta‑lactamase‑producing Pseudomonas aeruginosa by comparative genomics and phenotypic analysis
Registro en:
NASCIMENTO, Ana Paula Barbosa do et al. Characterization of a SPM‑1 metallo‑beta‑lactamase‑producing Pseudomonas aeruginosa by comparative genomics and phenotypic analysis. Scientific Reports, v. 20, 13192, 16p, 2020.
2045-2322
10.1038/s41598-020-69944-6
Autor
Nascimento, Ana Paula Barbosa do
Medeiros Filho, Fernando
Pauer, Heidi
Antunes, Luis Caetano Martha
Sousa, Hério
Senger, Hermes
Albano, Rodolpho Mattos
Santos, Marcelo Trindade dos
Carvalho-Assef, Ana Paula D’Alincourt
Silva, Fabrício Alves Barbosa da
Resumen
Pseudomonas aeruginosa is one of the most common pathogens related to healthcare-associated
infections. The Brazilian isolate, named CCBH4851, is a multidrug-resistant clone belonging to the
sequence type 277. The antimicrobial resistance mechanisms of the CCBH4851 strain are associated
with the presence of the blaSPM-1 gene, encoding a metallo-beta-lactamase, in combination with other
exogenously acquired genes. Whole-genome sequencing studies focusing on emerging pathogens are
essential to identify key features of their physiology that may lead to the identification of new targets
for therapy. Using both Illumina and PacBio sequencing data, we obtained a single contig representing
the CCBH4851 genome with annotated features that were consistent with data reported for the
species. However, comparative analysis with other Pseudomonas aeruginosa strains revealed genomic
differences regarding virulence factors and regulatory proteins. In addition, we performed phenotypic
assays that revealed CCBH4851 is impaired in bacterial motilities and biofilm formation. On the other
hand, CCBH4851 genome contained acquired genomic islands that carry transcriptional factors,
virulence and antimicrobial resistance-related genes. Presence of single nucleotide polymorphisms in
the core genome, mainly those located in resistance-associated genes, suggests that these mutations
may also influence the multidrug-resistant behavior of CCBH4851. Overall, characterization of
Pseudomonas aeruginosa CCBH4851 complete genome revealed the presence of features that strongly
relates to the virulence and antibiotic resistance profile of this important infectious agent.