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Bioinformatic detection of E47, E2F1 and SREBP1 transcription factors as potential regulators of genes associated to acquisition of endometrial receptivity
(2011)
Background: The endometrium is a dynamic tissue whose changes are driven by the ovarian steroidal hormones.
Its main function is to provide an adequate substrate for embryo implantation. Using microarray technology,
several ...
Bioinformatic survey for new physiological substrates of Cyclin-dependent kinase 5
(Elsevier, 2013)
Cyclin-dependent kinase 5 (Cdk5) is a proline-directed serine/threonine kinase predominantly active in the
nervous system where it regulates several processes such as neuronal migration, cytoskeletal dynamics,
axonal ...
chromPlot: visualization of genomic data in chromosomal context
(Oxford Univ Press, 2016)
Visualizing genomic data in chromosomal context can help detecting errors in data processing and may suggest new hypotheses to be tested. Here, we report a new tool for displaying large and diverse genomic data along ...
Adaptive computation of the discrete Fréchet distance
(Springer Verlag, 2018)
The discrete Fréchet distance is a measure of similarity between point sequences which
permits to abstract differences of resolution between the two curves, approximating the original Fréchet
distance between curves. ...
Gradual program verification
(Springer Verlag, 2018)
Both static and dynamic program verification approaches have significant disadvantages when considered in isolation. Inspired by research on gradual typing, we propose gradual verification to seamlessly and flexibly combine ...
Computing coverage kernels under restricted settings
(Springer Verlag, 2018)
We consider the Minimum Coverage Kernel problem: given a set B of d-dimensional boxes, find a subset of B of minimum size covering the same region as B. This problem is NP -hard, but as for many NP -hard problems on graphs, ...
Synergistic solutions for merging and computing planar convex hulls
(Springer Verlag, 2018)
We describe and analyze the first adaptive algorithm for merging k convex hulls in the plane. This merging algorithm in turn yields a synergistic algorithm to compute the convex hull of a set of planar points, taking ...
Towards hospitalization after readmission risk prediction using ELMs
(Springer Verlag, 2017)
A criteria to evaluate the performance of Emergency Departments (ED) is the number of readmissions and hospitalizations short time after discharge of patients because the problem was not solved in the first admission. Such ...
StructRNAfinder: an automated pipeline and web server for RNA families prediction
(BIOMED Central Ltd., 2018)
Background: The function of many noncoding RNAs (ncRNAs) depend upon their secondary structures. Over the last decades, several methodologies have been developed to predict such structures or to use them to functionally ...