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New hydrocarbon degradation pathways in the microbial metagenome from Brazilian petroleum reservoirs.
(Public Library of Science, 2014-01-01)
Current knowledge of the microbial diversity and metabolic pathways involved in hydrocarbon degradation in petroleum reservoirs is still limited, mostly due to the difficulty in recovering the complex community from such ...
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses
(BioMed Central Ltd., 2016-12-16)
Existing workflows for the analysis of multi-omic microbiome datasets are lab-specific and often result in sub-optimal data usage. Here we present IMP, a reproducible and modular pipeline for the integrated and ...
Unsupervised fuzzy binning of metagenomic sequence fragments on three-dimensional Barnes-Hut t-Stochastic Neighbor Embeddings
(Institute of Electrical and Electronics Engineers Inc., 2018-01-01)
Shotgun metagenomic studies attempt to reconstruct population genome sequences from complex microbial communities. In some traditional genome demarcation approaches, high-dimensional sequence data are embedded into ...
Unsupervised fuzzy binning of metagenomic sequence fragments on three-dimensional Barnes-Hut t-Stochastic Neighbor Embeddings
(Institute of Electrical and Electronics Engineers Inc., 2018-01-01)
Shotgun metagenomic studies attempt to reconstruct population genome sequences from complex microbial communities. In some traditional genome demarcation approaches, high-dimensional sequence data are embedded into ...
Unsupervised fuzzy binning of metagenomic sequence fragments on three-dimensional Barnes-Hut t-Stochastic Neighbor Embeddings
(Institute of Electrical and Electronics Engineers Inc., 2018-01-01)
Shotgun metagenomic studies attempt to reconstruct population genome sequences from complex microbial communities. In some traditional genome demarcation approaches, high-dimensional sequence data are embedded into ...
Labranza y fertilización como moduladores de la dinámica de comunidades microbianas asociadas a un cultivo de trigo en el sudeste bonaerense (Argentina)Tillage and fertilization as modulators of the dynamics of microbial communities associated with a wheat crop of southeast of Buenos Aires (Argentina)
(Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias, 2017)
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses
(BioMed Central Ltd., 2016-12-16)
Existing workflows for the analysis of multi-omic microbiome datasets are lab-specific and often result in sub-optimal data usage. Here we present IMP, a reproducible and modular pipeline for the integrated and ...