The genome of woodland strawberry (Fragaria vesca)

dc.creatorShulaev, V.
dc.creatorSargent, D.
dc.creatorCrowhurst, R.
dc.creatorMockler, T.
dc.creatorFolkerts, O.
dc.creatorDelcher, A.
dc.creatorJaiswal, P.
dc.creatorMockaitis, K.
dc.creatorListon, A.
dc.creatorMane, Sh.
dc.creatorBurns, P.
dc.creatorDavis, T.
dc.creatorSlovin, J.
dc.creatorBassil, N.
dc.creatorHellens, R.
dc.creatorEvans, C.
dc.creatorHarkins, T.
dc.creatorKodira, Ch.
dc.creatorDesany, B.
dc.creatorCrasta, O.
dc.creatorJensen, R.
dc.creatorAllan, A.
dc.creatorMichael, T.
dc.creatorSetubal, J.
dc.creatorCelton, J.
dc.creatorRees, J.
dc.creatorWilliams, K.
dc.creatorHolt, S.
dc.creatorRojas, J.
dc.creatorChatterjee, M.
dc.creatorSilva, H.
dc.creatorMeisel, L.
dc.creatorAdato, A.
dc.creatorFilichkin, S.
dc.creatorTroggio, M.
dc.creatorViola, R.
dc.creatorAshman, T.
dc.creatorWang, H.
dc.creatorDharmawardhana, P.
dc.creatorElser, J.
dc.creatorRaja, R.
dc.creatorPriest, H.
dc.creatorBryant, D.
dc.creatorFox, S.
dc.creatorGivan, S.
dc.creatorWilhelm, L.
dc.creatorNaithani, S.
dc.creatorChristoffels, A.
dc.creatorSalama, D.
dc.creatorCarter, J.
dc.creatorGirona, E.
dc.creatorZdepski, A.
dc.creatorWang, W.
dc.creatorKerstetter, R.
dc.creatorSchwab, W.
dc.creatorKorban, Sh.
dc.creatorDavik, J.
dc.creatorMonfort, A.
dc.creatorDenoyes-Rothan, B.
dc.date.accessioned2023-08-14T19:29:19Z
dc.date.accessioned2024-05-02T15:04:47Z
dc.date.available2023-08-14T19:29:19Z
dc.date.available2024-05-02T15:04:47Z
dc.date.created2023-08-14T19:29:19Z
dc.date.issued2011
dc.identifierNature Genetics, Volume 43, Issue 2, Pages 109 - 116, February 2011
dc.identifier1546-1718
dc.identifierhttps://repositorio.unab.cl/xmlui/handle/ria/52501
dc.identifier10.1038/ng.740
dc.identifier.urihttps://repositorioslatinoamericanos.uchile.cl/handle/2250/9262038
dc.description.abstractThe woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous perennial has a small genome (240 Mb), is amenable to genetic transformation and shares substantial sequence identity with the cultivated strawberry (Fragaria Ã- ananassa) and other economically important rosaceous plants. Here we report the draft F. vesca genome, which was sequenced to ×-39 coverage using second-generation technology, assembled de novo and then anchored to the genetic linkage map into seven pseudochromosomes. This diploid strawberry sequence lacks the large genome duplications seen in other rosids. Gene prediction modeling identified 34,809 genes, with most being supported by transcriptome mapping. Genes critical to valuable horticultural traits including flavor, nutritional value and flowering time were identified. Macrosyntenic relationships between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes. New phylogenetic analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted.
dc.languageen
dc.publisherSpringer Nature
dc.rightshttps://www-nature-com.recursosbiblioteca.unab.cl/articles/ng.740#rightslink
dc.rightsAttribution-NonCommercial-ShareAlike 3.0 Unported (CC BY-NC-SA 3.0)
dc.subjectAlgorithms
dc.subjectChloroplasts
dc.subjectChromosome Mapping
dc.subjectFragaria
dc.subjectGene Expression Profiling
dc.subjectGenes
dc.subjectPlant
dc.subjectGenetic Linkage
dc.titleThe genome of woodland strawberry (Fragaria vesca)
dc.typeArtículo


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