dc.contributorCorrales Osorio, Adriana
dc.contributorAdamčík, Slavomir
dc.creatorVera Castellanos, Michelle
dc.date.accessioned2020-02-12T19:42:35Z
dc.date.accessioned2022-09-22T14:46:21Z
dc.date.available2020-02-12T19:42:35Z
dc.date.available2022-09-22T14:46:21Z
dc.date.created2020-02-12T19:42:35Z
dc.identifierhttps://repository.urosario.edu.co/handle/10336/20860
dc.identifierhttps://doi.org/10.48713/10336_20860
dc.identifier.urihttp://repositorioslatinoamericanos.uchile.cl/handle/2250/3441956
dc.description.abstractRussula floriformis and R. symphoniae are described as two new sister species of Russula subsection Substriatinae from montane forest of Colombia and Panama and associated with Quercus and Oreomunnea trees. Very similar field environmental conditions and an ITS sequence similarity higher than 99% with only 3 different positions indicate that these species are closely related and nearly cryptic. Detailed observations of microscopic structures and analyses of more DNA loci revealed more morphological and molecular characters distinguishing collections of R. floriformis from Colombia and R. symphoniae from Panama. Spatial distribution and phylogenetic proximity of Russula species and their ectomycorrhizal host Quercus tree suggests their speciation as a result of migration, adaptation and climatic isolation across the Panama Isthmus of their host tree during the Pliocene and Pleistocene events. Then we hypothesize that this could be evidence of coevolution between Russula and Quercus. Analysis of publicly available ITS sequence data suggests that there are more locally adapted species of this lineage in Central and North America.
dc.languageeng
dc.publisherUniversidad del Rosario
dc.publisherBiología
dc.publisherFacultad de Ciencias Naturales y Matemáticas
dc.rightsinfo:eu-repo/semantics/openAccess
dc.rightsAbierto (Texto Completo)
dc.rightsEL AUTOR, manifiesta que la obra objeto de la presente autorización es original y la realizó sin violar o usurpar derechos de autor de terceros, por lo tanto la obra es de exclusiva autoría y tiene la titularidad sobre la misma.
dc.sourceAdamčík S, Jančovičová S, & Buyck B. 2018. The Russulas Described by Charles Horton Peck. Cryptogamie Mycologie, 39: 3–108.
dc.sourceAdamčík S, Looney B, Caboň M, Jančovičová S, Adamčíková K, Avis PG. Barajas M, Bhatt RP, Corrales A, Das K, Hampe F, Ghosh A, Gates G, Kälvläinen V, Khalid AN, Kiran M, De Lange R, Lee H, Lim YW, Kong A, Manz C, Ovrebo C, Saba M, Taipale T, Verbeken A, Wisitrassameewong K, Buyck B. 2019. The quest for a globally comprehensible Russula language. Fungal Diversity.
dc.sourceAdamčík S, Slovák M, Eberhardt U, Ronikier A, Jairus T, Hampe F, Verbeken A (2016b) Molecular inference, multivariate morphometrics and ecological assessment are applied in concert to delimit species in the Russula clavipes complex. Mycologia 108:716–730. https://doi.org/10.3852/15-194
dc.sourceAndersen KM, Endara MJ, Turner BL, Dalling JW. 2012. Trait-based community assembly of understory palms along a soil nutrient gradient in a lower montane tropical forest. Oecologia 168:519–531
dc.sourceÁvila-de Navia SL, Estupiñan-Torres SM. 2013. Calidad sanitaria del agua del Parque Natural Chicaque. NOVA 11:45-51.
dc.sourceBacon CD, Silvestro D, Jaramillo C, Smith BT, Chakrabarty P, Antonelli, A. 2015. Biological evidence supports and early and complex emergence of the Isthmus of Panama. Proceeding of the National Academy of Sciences 112: 6110-6115.
dc.sourceBadotti F, Silva de Oliveira F, Garcia CF, Vaz AMB, Fonseca PLC, Nahum LA, Oliveira G, Góes-Neto A. 2017. Effectiveness of ITS and sub-regions as DNA barcode markers for the identification of Basidiomycota (Fungi). BMC Microbiology 17: 42.
dc.sourceBazzicalupo AL, Buyck B, Saar I, Vauras J, Carmean D, Berbee ML. 2017. Troubles with mycorrhizal mushroom identification where morphological differentiation lags behind barcode sequence divergence. Taxon 66(4):791–810.
dc.sourceBecerra G, Zak M. 2011. The Ectomycorrhizal Symbiosis in South America: Morphology, Colonization, and Diversity. In: Baptista P, Tavares RM, Lino-Neto T. 2011. Diversity and Biotechnology of Ectomycorrhizae. Berlin, Germany. p. 157–175.
dc.sourceBecerra A, Zak MR, Horton TR, Micolini J. 2005. Ectomycorrhizal and arbuscular mycorrhizal colonization of Alnus acuminata from Calilegua National Park (Argentina). Mycorrhiza. 15: 525–531.
dc.sourceBuyck B. 1989. Valeur taxonomique du bleu de crésyl pour le genre Russula. Bull Soc Mycol Fr 105:1–6
dc.sourceBuyck B. 1992. Checklist of tropical Russulae. Russulales News, Special Issue 1: 1-100
dc.sourceBuyck B, Adamčík S. 2011. Type Studies in Russula Subgenus Heterophyllidia from the Eastern United States. Cryptogamie, Mycologie, 32: 151–169.
dc.sourceBuyck B, Halling R. 2004. Two new Quercus-associated Russulas from Costa Rica and their relation to some very rare North American species. Cryptogamie, Mycologie, 25: 3–13.
dc.sourceBuyck B, Halling RE, Miller GM. 2003. The inventory of Russula in Costa Rica: discovery of two very rare North American species in montane oak forest. Bolletino del Gruppo Micologico G. Bresadola – Nuova Serie 46(3): 57–74
dc.sourceBuyck B, Zoller S, Hofstetter V. 2018. Walking the thin line… ten years later: the dilemma of above- versus below-ground features to support phylogenies in the Russulaceae (Basidiomycota). Fungal Diversity 89: 267–292.
dc.sourceCaboň M, Eberhardt U, Looney B, Hampe F, Kolařík M, Jančovičová S, Verbeken A, Adamčík S. 2017. New insights in Russula subsect. Rubrinae: phylogeny and the quest for synapomorphic characters. Mycological Progress, 16: 877–892.
dc.sourceCaboň M, Li GJ, Saba M, Kolařík M, Jančovičová S, Khalid AN, Moreau PA, Wen HA, Pfister DH, Adamčík S. 2019. Phylogenetic study documents different speciation mechanisms within the Russula globispora lineage in boreal and arctic environments of the Northern Hemisphere. IMA Fungus 10: 1–16
dc.sourceCavelier J .1996. Fog interception in montane forests across the central cordillera of Panama. J Trop Ecol 12:357–369
dc.sourceCorrales A, Arnold AE, Ferrer A, Turner BL, Dalling JW. 2016. Variation in ectomycorrhizal fungal communities associated with Oreomunnea mexicana (Juglandaceae) in a Neotropical montane forest. Mycorrhiza 26: 1–17.
dc.sourceCorrales A, Henkel TW, Smith ME. 2018. Ectomycorrhizal associations in the tropics – biogeography, diversity patterns and ecosystem roles. New Phytologist, 220: 1076–1091.
dc.sourceCorrea A, Galdames C, Stapf MS. 2004. Catalogue of vascular plants of Panama. Universidad de Panamá, Instituto de Investigaciones Tropicales
dc.sourceDel Olmo-Ruiz M, García-Sandoval R, Alcántara-Ayala O, Véliz M, Luna-Vega I. 2017. Current knowledge of fungi from Neotropical montane cloud forests: distributional patterns and composition. Biodiversity and Conservation 26: 1919–1942.
dc.sourceDiédhiou AG, Selosse MA, Galiana A, Diabaté M, Dreyfus B, Bâ AM, de Faria SM, Béna, G. 2010. Multi-host ectomycorrhizal fungi are predominant in a Guinean tropical rainforest and shared between canopy trees and seedlings. Environmental Microbiology 12: 2219–2232.
dc.sourceFranco-Molano AE, Corrales A, Vasco-Palacios AM. 2010. Macrogundi of Colombia II. Checklist of the species of Agaricales, Boletales, Cantharellales and Russulales (Agaricomycetes, Basidiomycota). Actualidad Biologicas 32: 89-114.
dc.sourceGarcía-Guzmán OM, Garibay-Orijel R, Hernández E, Arellano-Torres E, & Oyama K. 2017. Word-wide meta-analysis of Quercus forests ectomycorrhizal fungal diversity reveals southwestern Mexico as a hotspot. Mycorrhiza 27: 811–822.
dc.sourceGardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Molecular Ecology 2:113–118.
dc.sourceGonzález CE, Jarvis A, Palacio JD. 2006. Biogeography of the Colombian oak, Quercus humboldtii Bonpl: geographical distribution and their climatic adaptation. International Centre for Tropical Agriculture (CIAT)/Museo de Historia Natural, Universidad Del Cauca.10p.
dc.sourceHall T. 2005. BioEdit: Biological Sequence Alignment Editor. http://www.mbio.ncsu.edu/bioedit/bioedit.html
dc.sourceHaug I, Weiß M, Homeier J, Oberwinkler F, Kottke I. 2005. Russulaceae and Thelephoraceae form ectomycorrhizas with members of the Nyctaginaceae (Caryophyllales) in the tropical mountain rain forest of southern Ecuador. New Phytologist, 165: 923–936.
dc.sourceHynes MM, Smith ME, Zasoski RJ, Bledsoe CS. 2010. A molecular survey of ectomycorrhizal hyphae in a California Quercus–Pinus woodland. Mycorrhiza 20: 265–274
dc.sourceHerrera F, Manchester SR, Koll R, Jaramillo C. 2014. Fruits of Oreomunnea (Juglandaceae) in the early Miocene of Panama. In: Stevens WD, Montiel OM, Raven PH, Paleobotany and Biogeography: A Festschrift for Alan Graham in His 80th Year, 124–133. St Louis. Missouri Botanical Garden Press.
dc.sourceHooghiemstra H. 2006. Immigration of Oak into Northern South America: A Paleo-Ecological Document. In: Kappelle M. Ecology and Conservation of Neotropical Montane Oak Forests. Berlin, Germany. Springer. p 17–28.
dc.sourceJaramillo C. 2018. Evolution of the Isthmus of Panama: Biological, Paleoceanographic and Paleoclimatological Implications. In: Hoorn C, Perrigo A, Antonelli A, Mountains, Climate and Biodiversity. Hoboken, New Jersey. John Wiley & Sons. P 323-337.
dc.sourceKatoh K., Standley D.M. 2013. MAFFT multiple sequence alignment software, version 7: improvements in performance and usability. Molecular Biology and Evolution 30:772–780
dc.sourceKearse M., Moir R., Wilson A., Stones-Havas S., Cheung M. et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647–1649
dc.sourceLanfear R., Calcott B., Ho S.Y., Guindon S., Lanfear R. et al. 2012. PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution 29:1695–1701
dc.sourceLooney BP, Meidl P, Piatek MJ, Miettinen O, Martin FM, Matheny PB, Labbé JL. 2018. Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates. New Phytologist 218: 54–66.
dc.sourceLooney BP, Ryberg M, Hampe F, Sánchez-García M, Matheny PB. 2016. Into and out of the tropics: Global diversification patterns in a hyperdiverse clade of ectomycorrhizal fungi. Molecular Ecology 25: 630–647.
dc.sourceManz C. 2019. Diversity assessment of the ectomycorrhizal genus Russula in tropical montane forests in Masterarbeit.
dc.sourceMatheny PB .2005 Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales). Mol Phylogenet Evol 35:1–20. doi:10.1016/j.ympev.2004.11.014
dc.sourceMiller M.A., Pfeiffer W., Schwartz T. 2010 Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE), 14 Nov. 2010, New Orleans, LA pp 1 - 8.
dc.sourceMoncalvo JM, Lutzoni FM, Rehner SA, Johnson J, Vilgalys R (2000) Phylogenetic relationship of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Syst Biol 49(2): 278–305. https://doi.org/10.1093/sysbio/49.2.278
dc.sourceMorehouse EA, James TY, Ganley ARD, Vilgalys R, Berger L, Murphy PJ, Longcore E. 2003 – Multilocus sequences typing suggests the chytrid pathogen of amphibians is a recently emerged clone. Molecular Ecology 12:395–403
dc.sourceNilsson RH, Ryberg M, Kristiansson E, Abarenkov K, Larsson KH, Köljalg U. 2006. Taxonomic reliability of DNA sequences in public sequences databases: A fungal perspective. PLoS ONE 1: e59
dc.sourceNixon KC. 2006. Global and Neotropical Distribution and Diversity of Oak (genus Quercus) and Oak Forests. In: Ecology and Conservation of Neotropical Montane Oak Forests. Berlin, Germany. Springer. p. 3–13.
dc.sourceOndrušková E, Jánošíková Z, Kádasi-Horáková M, Koltay A, Ostrovský R, Pažitný J, Adamčíková K. 2017 – Distribution and characterization of Dothistroma needle blight pathogens on Pinus mugo in Slovakia. European Journal of Plant Pathology 148(2):283–294. https://link.springer.com/article/10.1007/s10658-016-1088-2
dc.sourcePastirčáková K, Adamčíková K, Pastirčák M, Zach P, Galko J, Kováč M, Laco J. 2018 – Two blue-stain fungi colonizing Scots pine (Pinus sylvestris) trees infested by bark beetles in Slovakia, Central Europe. Biologia 73(11):1053–1066.
dc.sourceRambaut A., Suchard M.A., Xie D., Drummond A.J. 2013. Tracer. Version 1.6. http://beast.bio.ed.ac.uk/software/tracer/
dc.sourceRangel JO, Avella A. 2011. Oak forests of Quercus humboldtii in the Caribbean region and distribution patterns related with environmental factor in Colombia. Plant Biosystems 145: 186-198.
dc.sourceRichard F, Millot S, Gardes M, Selosse M-A. 2005. Diversity and specificity of ectomycorrhizal fungi retrieved from an old-growth Mediterranean forest dominated by Quercus ilex. New Phytologist 166: 1011–1023.
dc.sourceRivera-Ospina D, Córdoba-García C. 1998. Guía ecológica Parque Natural Chicaque. Bogotá, Colombia, Jardín Botánico de Bogotá José Celestino Mutis.
dc.sourceRodríguez-Correa F, Oyama K, MacGregor-Fors I, González-Rodríguez A. 2015. How are oaks distributed in the Neotropics? A perspective from species turnover, areas of endemism and climatic niches. International Journal of Plant Sciences 176: 222-231.
dc.sourceRomagnesi H (1967) Les Russules D’Europe et D’Afrique du Nord. Bordas, Paris Ronquist F., Teslenko M., van der Mark P., Avres D.L., Darling A. et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice, across a large model space. Systematic Biology 61:539–542
dc.sourceRoy M, Schimann H, Braga-Neto R, Da Silva RAE, Duque J, Frame D, Frame D, Wartchow F, Neves MA. 2016. Diversity and Distribution of Ectomycorrhizal Fungi from Amazonian Lowland White-sand Forests in Brazil and French Guiana. Biotropica 48: 90–100.
dc.sourceRoy M, Vasco-Palacios A, Geml J, Buyck B, Delgat L, Giachini A, Grebenc T, Harrower, E, Kuhar F, Magnano A, Rinaldi A, Shimann H, Selosse MA, Sulzbacher MA, Warthchow F, Neves, M. A. 2017. The (re)discovery of ectomycorrhizal symbioses in Neotropical ecosystems sketched in Florianópolis. New Phytologist 214: 920–923.
dc.sourceSilvestro D., Michalak I. 2012. raxmlGUI: a graphical front-end for RAxML. Organismal Diversity and Evolution 12:335–337
dc.sourceSmith ME, Henkel TW, Aime CM, Fremier AK, Vilgalys R. 2011. Ectomycorrhizal fungal diversity and community structure on three co-occurring leguminous canopy tree species in a Neotropical rainforest. New Phytologist 192: 699–712.
dc.sourceStamatakis A. 2008. The RAxML 7.0.4 manual. https://web.natur.cuni.cz/~vlada/moltax/RAxML-Manual.7.0.4.pdf
dc.sourceVasco-Palacios AM, Franco-Molano AE. 2013. Diversity of Colombian macrofungi (Ascomycota-Basidiomycota). Mycotaxon. 121:499
dc.sourceWang J, Buyck B, Wang XH, Bau T. 2019. Visiting Russula (Russulaceae, Russulales) with samples from southwestern China finds one new subsection of R. subg. Heterophyllidia with two new species. Mycological Progress 18: 771–784.
dc.sourceWang Q, He XH, Guo L-D. 2012. Ectomycorrhizal fungus communities of Quercus liaotungensis Koidz of different ages in a northern China temperate forest. Mycorrhiza 22: 461–470
dc.sourceWhite TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols: a guide to methods and applications. Academic Press, San Diego, pp 315–322
dc.sourceWu Q, Mueller GM, Ovrebo CL. 1997. An index to Genera, Species and Infraspecific Taxa of Basidiomycete Fungi described by Rolf Singer. In: Mueller GM, Wu Q (eds) Mycological contributions of Rolf Singer: Field Itinerary, Index to New Taxa, and List of Publications. Fieldiana, Field Museam of Natural History, Chicago, Illinois, pp 90-93
dc.sourceYe J, Coulouris G, Zaretskaya I, Cutcutache I, Rozen S, Madden TL. 2012. Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction. BMC Bioinformatics 13:134.
dc.sourceQuercus L. in GBIF Secretariat (2019). GBIF Backbone Taxonomy. Checklist dataset https://doi.org/10.15468/39omei accessed via GBIF.org
dc.sourceinstname:Universidad del Rosario
dc.sourcereponame:Repositorio Institucional EdocUR
dc.subjectAmerica
dc.subjectBosque montano tropical
dc.subjectCoevolución
dc.subjectDiversidad
dc.subjectEctomicorriza
dc.subjectEspecies cripticas
dc.subjectFagaceae
dc.subjectJuglandaceae
dc.titleTwo new tropical Russula species associated with Quercus show evidence of diversification across the Isthmus of Panama
dc.typebachelorThesis


Este ítem pertenece a la siguiente institución