Artículos de revistas
A Genetic Framework For Flowering-time Pathways In Citrus Spp
Registro en:
Genetics And Molecular Biology. , v. 30, n. 3 SUPPL., p. 769 - 779, 2007.
14154757
2-s2.0-38049153697
Autor
Dornelas M.C.
Camargo R.L.B.
Figueiredo L.H.M.
Takita M.A.
Institución
Resumen
Floral transition is one the most drastic changes occurring during the life cycle of a plant. The shoot apical meristem switches from the production of leaves with associated secondary shoot meristems to the production of flower meristems. This transition is abrupt and generally irreversible, suggesting it is regulated by a robust gene regulatory network capable of driving sharp transitions. The moment at which this transition occurs is precisely determined by environmental and endogenous signals. A large number of genes acting within these pathways have been cloned in model herbaceous plants such as Arabidopsis thaliana. In this paper, we report the results of our search in the Citrus expressed sequence tag (CitEST) database for expressed sequence tags (ESTs) showing sequence homology with known elements of flowering-time pathways. We have searched all sequence clusters in the CitEST database and identified more than one hundred Citrus spp sequences that codify putative conserved elements of the autonomous, vernalization, photoperiod response and gibberelic acid-controlled flowering-time pathways. Additionally, we have characterized in silico putative members of the Citrus spp homologs to the Arabidopsis CONSTANS family of transcription factors. Copyright by the Brazilian Society of Genetics. Printed in Brazil. 30 3 SUPPL. 769 779 Ahmad, M., Cashmore, A.R., HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photo-receptor (1993) Nature, 366, pp. 162-166 Altschul, S.F., Madden, T.L., Schäffer, A.A., Zhang, J., Zhang, Z., Miller, W., Lipman, D.J., Gapped BLAST and PSI-BLAST: A new generation of protein database search programs (1997) Nucleic Acids Res, 25, pp. 3389-3402 Amasino, R., Vernalization, competence, and the epigenetic memory of winter (2004) Plant Cell, 16, pp. 2553-2559 An, H., Roussot, C., Suarez-Lopez, P., Corbesier, L., Vincent, C., Pineiro, M., Heptworth, S., Turnbull, C., CONSTANS acts in the phloem to regulate a systemic signal that induces photoperiodic flowering of Arabidopsis (2004) Development, 131, pp. 3615-3626 Araki, T., Transition from vegetative to reproductive phase (2001) Curr Opin Plant Biol, 4, pp. 63-68 Ayre, B.G., Turgeon, R., Graft transmission of a floral stimulant derived from CONSTANS (2004) Plant Physiol, 135, pp. 2271-2278 Bastow, R., Dean, C., Plant sciences. Deciding when to flower (2003) Science, 302, pp. 1695-1696 Ben-Naim, O., Eshed, R., Parnis, A., Teper-Bamnolker, P., Shalit, A., Coupland, G., Samach, A., Lifschitz, E., The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA (2006) Plant J, 46, pp. 462-476 Bernier, G., Havelange, A., Houssa, C., Petitjean, A., Lejeune, P., Physiological signals that induce flowering (1993) Plant Cell, 5, pp. 1147-1155 Blazquez, M.A., Weigel, D., Integration of floral inductive signals in Arabidopsis (2000) Nature, 404, pp. 889-892 Blazquez, M.A., Green, R., Nilsson, O., Sussman, M.R., Weigel, D., Gibberelins promote flowering of Arabidopsis by activating the LEAFY promoter (1998) Plant Cell, 10, pp. 791-800 Boss, P.K., Vivier, M., Matsumoto, S., Dry, I.B., Thomas, M.R., A cDNA from grapevine (Vitis vinifera L.), which shows homology to AGAMOUS and SHATTERPROOF, is not only expressed in flowers but also throughout berry development (2001) Plant Mol Biol, 45, pp. 541-553 Boss, P.K., Sensi, E., Hua, C., Davies, C., Thomas, M.R., Cloning and characterization of grapevine (Vitis vinifiera L.) MADS-box genes expressed during inflorescence and berry development (2002) Plant Sci, 162, pp. 887-895 Boss, P.K., Bastow, R.M., Mylne, J.S., Dean, C., Multiple pathways in the decision to flower: Enabling, promoting, and resetting (2004) Plant Cell, 16 (SUPPL.), pp. S18-S31 Briggs, W.R., Beck, C.F., Cashmore, A.R., Christie, J.M., Hughes, J., Jarillo, J.A., Kagawa, T., Nagatani, A., The phototropin family of photoreceptors (2001) Plant Cell, 13, pp. 993-997 Chandler, J., Wilson, A., Dean, C., Arabidopsis mutants showing an altered response to vernalization (1996) Plant J, 10, pp. 637-644 Colasanti, J., Sundaresan, V., Florigen' enters the molecular age: Long-distance signals that cause plants to flower (2000) Trends Biochem Sci, 25, pp. 236-240 Dornelas, M.C., Rodriguez, A.P.M., Identifying Eucalyptus expressed sequence tags related to Arabidopsis flowering-time pathway genes (2005) Braz J Plant Physiol, 17, pp. 255-266 Dornelas, M.C., Rodriguez, A.P.M., Evolutionary conservation of genes controlling flowering pathways between Arabidopsis and grasses (2006) Floriculture, Ornamental and Plant Biotechnology, 4, pp. 272-279. , Teixeira da Silva JA ed, 1st edition. Global Science Books, London, pp Dornelas, M.C., Amaral, W.A.N., Rodriguez, A.P.M., EgLFY, the Eucalyptus grandis homolog of the Arabidopsis gene LEAFY is expressed in reproductive and vegetative tissues (2004) Braz J Plant Physiol, 16, pp. 105-114 Doyle, M.R., Davis, S.J., Bastow, R.M., McWatters, H.G., Kozma-Bognar, L., Nagy, F., Millar, A.J., Amasino, R.M., The ELF4 controls circadian rhythms and flowering time in Arabidopsis thaliana (2002) Nature, 419, pp. 74-77 Garcia-Luis, A., Kanduser, M., Changes in dormancy and sensitivity to vernalization in axillary buds of Satsuma mandarin examined in vitro during the annual cycle (1995) Ann Bot, 76, pp. 451-455 Garcia-Luis, A., Kanduser, M., Santamarina, P., Guardiola, J.L., Low temperature influence on flowering in Citrus. The separation of inductive and bud dormancy releasing effects (1992) Physiol Plant, 86, pp. 648-652 Garcia-Luis, A., Kanduser, M., Guardiola, J.L., The influence of fruiting on the bud sprouting and flower induction responses to chilling in Citrus (1995) J Hort Sci, 70, pp. 817-825 Griffiths, S., Dunford, R.D., Coupland, G., Laurie, D.A., The evolution of the CONSTANS-like gene families in barley, rice and Arabidopsis (2003) Plant Physiol, 131, pp. 1855-1867 Guardiola, J.L., Monerri, C., Agusti, M., The inhibitory effect of gibberellic acid on flowering in Citrus (1982) Physiol Plant, 55, pp. 136-142 Hall TA (1999) BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98Hepworth, S.R., Valverde, F., Ravenscroft, D., Mouradov, A., Coupland, G., Antagonistic regulation of flowering-time gene SOC1 by CONSTANS and FLC via separate promoter motifs (2002) Embo J, 21, pp. 4327-4337 Hicks, K.A., Albertson, T.M., Wagner, D.R., EARLY FLOWERING3 encodes a novel protein that regulates circadian clock function and flowering in Arabidopsis (2001) Plant Cell, 13, pp. 1281-1292 Huang, X., Madan, A., CAP3: A DNA sequence assembly program (1999) Genome Res, 9, pp. 868-877 Izawa, T., Takahashi, Y., Yano, M., Comparative biology comes into bloom: Genomic and genetic comparison of flowering pathways in rice and Arabidopsis (2003) Curr Opin Plant Biol, 6, pp. 113-120 Johanson, U., West, J., Lister, C., Michaels, S., Amasino, R., Dean, C., Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time (2000) Science, 290, pp. 344-347 Koltunow, A.M., Smith, A.V., Sykes, S.R., Molecular and conventional breeding strategies for seedless Citrus (2000) Acta Hort, 535, pp. 169-174 Kotoda, N., Wada, M., Komori, S., Kidou, S., Abe, K., Masuda, T., Soejima, J., Expression pattern of homologues of floral meristem identity genes LFY and AP1 during flower development in apple (2000) J Amer Soc Hort Sci, 125, pp. 398-403 Krajewski, A.J., Rabe, E., Citrus flowering: A critical evaluation (1995) J Hort Sci, 70, pp. 357-374 Kyozuka, J., Harcourt, R., Peacock, W.J., Dennis, E.S., Eucalyptus has functional equivalents of the Arabidopsis AP1 gene (1997) Plant Mol Biol, 35, pp. 573-584 Lagercrantz, U., Axelsson, T., Rapid evolution of the family of CONSTANS like genes in plants (2000) Mol Biol Evol, 17, pp. 1499-1507 Lin, C., Yang, H., Guo, H., Mockler, T., Chen, J., Cashmere, A.R., Enhancement of the blue-light sensitivity of Arabidopsis young seedlings by a blue-light receptor cry2 (1998) Proc Natl Acad Sci USA, 95, pp. 2686-2690 Lohmann, J.U., Weigel, D., Building beauty: The genetic control of floral patterning (2002) Dev Cell, 2, pp. 135-142 Long, J., Barton, M.K., Initiation of axillary and floral meristems in Arabidopsis (2000) Dev Biol, 218, pp. 341-353 Lord, E.M., Eckard, K.J., Shoot development in Citrus sinensis L. (Washington navel orange). II. Alteration of developmental fate of flowering shoots after GA3 treatment (1987) Bot Gaz, 148, pp. 17-22 Marchler-Bauer, A., Anderson, J.B., Cherukuri, P.F., DeWeese-Scott, C., Geer, L.Y., Gwadz, M., He, S., Ke, Z., CDD: A Conserved Domain Database for protein classification (2005) Nucleic Acids Res, 33, pp. 192-196 Martin, J., Storgaard, M., Andersen, C.H., Nielsen, K.K., Photoperiodic regulation of flowering in perennial ryegrass involving a CONSTANS-like homolog (2004) Plant Mol Biol, 56, pp. 159-169 Michaels, S.D., Amasino, R.M., FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering (1999) Plant Cell, 11, pp. 949-956 Mockler, T.H., Guo, H., Yang, H., Duong, H., Lin, C., Antagonistic actions of Arabidopsis cryptochromes and phytochrome B in the regulation of floral induction (1999) Development, 126, pp. 2073-2082 Monselise, S.P., Halevy, A.H., Chemical inhibition and promotion of citrus flower bud induction (1964) Am Soc Hort Sci, 84, pp. 141-146 Moon, Y.-H., Chen, L., Pan, R.L., Chang, J.-S., Zhu, T., Maffeo, D.M., Sung, Z.R., EMF genes maintain vegetative development by repressing the flower program in Arabidopsis (2003) Plant Cell, 15, pp. 681-693 Mouradov, A., Cremer, F., Coupland, G., Control of flowering time: Interacting pathways as a basis for diversity (2002) Plant Cell, (SUPPL.EMENT), pp. S11-S130 Ohto, M., Onai, K., Furukawa, Y., Aoki, E., Araki, T., Nakamura, K., Effects of sugar on vegetative development and floral transition in Arabidopsis (2001) Plant Physiol, 127, pp. 252-261 Parcy, F., Flowering: A time for integration (2005) Int J Dev Biol, 49, pp. 585-593 Peacock, W.J., Dennis, E.S., The FLF MADS box gene: A repressor of flowering in Arabidopsis regulated by vernalization and methylation (1999) Plant Cell, 11, pp. 445-458 Pena, L., Martin-Trillo, M., Juarez, J., Pina, J.A., Navarro, L., Martinez-Zapater, J.M., Constitutive expression of Arabidopsis LEAFY or APETALA1 genes in citrus reduces their generation time (2001) Nat Biotech, 19, pp. 263-267 Pillitteri, L.J., Lovatt, C.J., Walling, L.L., Isolation and characterization of LEAFY and APETALA1 homologues from Citrus sinensis L. Osbeck 'Washington' (2004) J Amer Soc Hort Sci, 129, pp. 846-856 Putterill, J., Robson, F., Lee, K., Simon, R., Coupland, G., The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors (1995) Cell, 80, pp. 847-857 Reed, J.W., Nagpal, P., Poole, D.S., Furaya, M., Chory, J., Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development (1993) Plant Cell, 5, pp. 147-157 Robson, F., Costa, M.M.R., Hepworth, S., Vizir, I., Pineiro, M., Reeves, P.H., Putterill, J., Coupland, G., Functional importance of conserved domains in the flowering-time gene CONSTANS demonstrated by analysis of mutant alleles and transgenic plants (2001) Plant J, 28, pp. 619-631 Saitou, N., Nei, M., The neighbour joining method: A new method for reconstructing phylogenetic trees (1987) Mol Biol Evol, 4, pp. 406-425 Sheldon, C.C., Rouse, D.T., Finnegan, E.J., Peacock, W.J., Dennis, E.S., The molecular basis of vernalization: The central role of FLOWERING LOCUS C (FLC) (2000) Proc Natl Acad Sci USA, 97, pp. 3753-3758 Simpson, G.G., Dean, C., Arabidopsis, the Rosetta stone of flowering time? (2002) Science, 296, pp. 285-289 Simpson, G.G., Gendall, A.R., Dean, C., When to switch to flowering (1999) Annu Rev Cell Dev Biol, 15, pp. 519-550 Southerton, S.G., Strauss, S.H., Olive, M.R., Harcourt, R.L., Decroocq, V., Zhu, X., Llewellyn, D.J., Dennis, E.S., Eucalyptus has a functional equivalent of the Arabidopsis floral meristem identity gene LEAFY (1998) Plant Mol Biol, 37, pp. 897-910 Suarez-Lopez, P., Wheatley, K., Robson, F., Onouchi, H., Valverde, F., Coupland, G., CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis thaliana (2001) Nature, 410, pp. 1116-1120 Sung, S.K., Yu, G.H., An, G., Characterization of MdMADS2, a member of the SQUAMOSA subfamily of genes, in apple (1999) Plant Physiol, 120, pp. 969-978 Sung, S.K., Yu, G.H., Nam, J., Jeong, D.H., An, G., Developmentally regulated expression of two MADS-box genes, MdMADS3 and MdMADS4, in the morphogenesis of flower buds and fruits in apple (2000) Planta, 210, pp. 519-528 Takada, S., Goto, K., TERMINAL FLOWER2, an Arabidopsis homolog of HETEROCHROMATIN PROTEIN1, counteracts the activation of FLOWERING LOCUS T by CONSTANS in the vascular tissues of leaves to regulate flowering time (2003) Plant Cell, 15, pp. 2856-2865 Thompson, J.D., Higgins, D.G., Gibson, T.J., CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice (1994) Nucleic Acids Res, 22, pp. 4673-4680 Valverde, F., Mouradov, A., Soppe, W., Ravenscroft, D., Samach, A., Coupland, G., Photoreceptor regulation of CONSTANS protein in photoperiodic flowering (2004) Science, 303, pp. 1003-1006 Wilson, R.N., Heckman, J.W., Somerville, C.R., Gibberelin is required for flowering in Arabidopsis thaliana under short days (1992) Plant Physiol, 100, pp. 403-408 Yao, J.-L., Dong, Y.-H., Kvarnheden, A., Morris, B., Seven MADS-box genes in apple are expressed in different parts of the fruit (1999) J Amer Soc Hort Sci, 124, pp. 8-13 Zeevaart, J.A.D., Physiology of flower formation (1976) Annu Rev Plant Physiol, 27, pp. 321-348 Zhang, H., van Necker, S., The VERNALIZATION 4 gene encodes a novel regulator of FLOWERING LOCUS C (2002) Plant J, 31, pp. 663-667 Zobell, O., Coupland, G., Reiss, B., The family of CONSTANS-like genes in Physcomitrella patens (2005) Plant Biol, 7, pp. 266-275