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Chromatin Packing in Normal and Teratozoospermic Human Ejaculated Spermatozoa
(1983)
Chromatinpackung in normalen Spermatozoen und solchen von Männern mit Teratozoospermie Normalgeformte ovale und Teratozoospermie‐Spermatozoen wurden mittels verschiedener Untersuchungstechniken miteinander verglichen ...
Protein chain packing and percolation threshold
(2006)
The major factor that drives a protein chain toward collapse and folding is the hydrophobic effect. Amino acids with apolar side chains join forming a solvent-shielded hydrophobic core. This process pack the structure in ...
Too packed to change: Side-chain packing and site-specific substitution rates in protein evolution
(PeerJ Inc, 2015-04)
In protein evolution, due to functional and biophysical constraints, the rates of amino acid substitution differ from site to site. Among the best predictors of site-specific rates are solvent accessibility and packing ...
Adherence of Packing Defects in Soluble Proteins
(American Physical Society, 2003-07)
For protein structure to prevail in water, its backbone hydrogen bonds must be shielded from water attack, requiring a cluster of “wrapping” nonpolar groups. Thus, underwrapped regions are adhesive, as exogenous removal ...
Self-affine analysis of protein energy
(2010)
We study the time series of the total energy of polypeptides and proteins. These time series were generated by molecular dynamics methods and analyzed by applying detrended
fluctuation analysis to estimate the long-range ...
Site-Specific Structural Constraints on Protein Sequence Evolutionary Divergence: Local Packing Density versus Solvent Exposure
(Oxford University Press, 2013-10)
Protein sequences evolve under selection pressures imposed by functional and biophysical requirements, resulting in site-dependent rates of amino acid substitution. Relative solvent accessibility (RSA) and local packing ...
Water promotes the sealing of nanoscale packing defects in folding proteins
(Iop Publishing, 2014-05)
A net dipole moment is shown to arise from a non-Debye component of water polarization created by nanoscale packing defects on the protein surface. Accordingly, the protein electrostatic field exerts a torque on the induced ...
Determination of electrokinetic and hydrodynamic parameters of proteins by modeling their electrophoretic mobilities through the electrically charged spherical soft particle
(Wiley VCH Verlag, 2013-03)
This work explores the possibility of using the electrically charged "spherical soft particle" (SSP) to model the electrophoretic mobility of proteins in the low charge regime. The general framework concerning the ...