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Uncovering patterns of the evolution of genomic sequence entropy and complexity
(2021-03-01)
The lack of consensus concerning the biological meaning of entropy and complexity of genomes and the different ways to assess these data hamper conclusions concerning what are the causes of genomic entropy variation among ...
Fish genomics and its impact on fundamental and applied research of vertebrate biology
(2021-01-01)
The living fishes span a unique and interesting set of animals because of their vast diversity, morphology, ecology, genetics and genomics, and higher importance to biology, economy and culture. During the past decade, the ...
Comparative genomic analysis of plant-associated bacteria
(Annual Reviews, 2002-01-01)
This review deals with a comparative analysis of seven genome sequences from plant-associated bacteria. These are the genomes of Agrobacterium tumefaciens, Mesorhizobium loti, Sinorhizobium meliloti, Xanthomonas campestris ...
Genome size versus genome assemblies: Are the genomes truly expanded in polyploid fungal symbionts?
(2020-01-01)
Each day, as the amount of genomic data and bioinformatics resources grows, researchers are increasingly challenged with selecting the most appropriate approach to analyze their data. In addition, the opportunity to undertake ...
A practical guide for comparative genomics of mobile genetic elements in prokaryotic genomes
(2018-01-01)
Mobile genetic elements (MGEs) are an important feature of prokaryote genomes but are seldom well annotated and, consequently, are often underestimated. MGEs include transposons (Tn), insertion sequences (ISs), prophages, ...
The Buffalo Genome and the Application of Genomics in Animal Management and Improvement
(Int Buffalo Information Ctr, 2013-01-01)
The publication of the human genome sequence in 2001 was a major step forward in knowledge necessary to understand the variations between individuals. For farmed species, genomic sequence information will facilitate the ...
Whole-genome comparative analysis of the pathogen Piscirickettsia salmonis
(Elsevier, 2016)
The intracellular pathogen Piscirickettsia salmonis is the etiological agent of piscirickettsiosis, the most important bacterial disease that affects the Chilean salmon industry. Despite its importance, little is known ...
Integrating cytogenetics and genomics in comparative evolutionary studies of cichlid fish
(Biomed Central Ltd., 2012-09-09)
Background: The availability of a large number of recently sequenced vertebrate genomes opens new avenues to integrate cytogenetics and genomics in comparative and evolutionary studies. Cytogenetic mapping can offer ...