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Mostrando ítems 11-20 de 1951
Mapping of protein structural ensembles by chemical shifts
(Springer NetherlandsDordrecht, 2010-10)
Applying the chemical shift prediction programs SHIFTX and SHIFTS to a data base of protein structures with known chemical shifts we show that the averaged chemical shifts predicted from the structural ensembles explain ...
Computational prediction of short linear motifs from protein sequences
(Springer, 2015-01)
Short Linear Motifs (SLiMs) are functional protein microdomains that typically mediate interactions between a short linear region in one protein and a globular domain in another. SLiMs usually occur in structurally disordered ...
Improving Predictions of Protein-Protein Interfaces by Combining Amino Acid-Specific Classifiers Based on Structural and Physicochemical Descriptors with Their Weighted Neighbor Averages
(Public Library ScienceSan FranciscoEUA, 2014)
Enhanced Van der Waals calculations in genetic algorithms for protein structure prediction
(John Wiley and SonsMalden, MA, 2013-10)
Several ab initio computational methods for protein structure prediction have been designed using full-atom models and force field potentials to describe interactions among atoms. Those methods involve the solution of a ...
Analyzing the effect of homogeneous frustration in protein folding
(2013-10-01)
The energy landscape theory has been an invaluable theoretical framework in the understanding of biological processes such as protein folding, oligomerization, and functional transitions. According to the theory, the energy ...
Analyzing the effect of homogeneous frustration in protein folding
(2013-10-01)
The energy landscape theory has been an invaluable theoretical framework in the understanding of biological processes such as protein folding, oligomerization, and functional transitions. According to the theory, the energy ...
Prediction of binding hot spot residues by using structural and evolutionary parameters
(Sociedade Brasileira de Genética, 2009)
Solvent structure improves docking prediction in lectin-carbohydrate complexes
(Oxford University Press, 2013-02)
Recognition and complex formation between proteins and carbohydrates is a key issue in many important biological processes. Determination of the three-dimensional structure of such complexes is thus most relevant, but ...
Using protein design algorithms to understand the molecular basis of disease caused by protein-DNA interactions: The Pax6 example
(Oxford University Press, 2010-11)
Quite often a single or a combination of protein mutations is linked to specific diseases. However, distinguishing from sequence information which mutations have real effects in the protein's function is not trivial. Protein ...