The complete mitochondrial genome of a Peruvian creole cattle (Bos taurus) and its phylogenetic analysis

dc.creatorArbizu Berrocal, Carlos Irvin
dc.creatorFerro Mauricio, Rubén Darío
dc.creatorChávez Galarza, Julio César
dc.creatorVásquez Pérez, Héctor Vladimir
dc.creatorMaicelo Quintana, Jorge Luis
dc.creatorPoemape Tuesta, Carlos Augusto
dc.creatorGonzáles, J.
dc.creatorQuilcate Pairazamán, Carlos Enrique
dc.creatorCorredor Arizapana, Flor Anita
dc.date.accessioned2023-08-29T14:28:37Z
dc.date.accessioned2024-05-09T18:54:44Z
dc.date.available2023-08-29T14:28:37Z
dc.date.available2024-05-09T18:54:44Z
dc.date.created2023-08-29T14:28:37Z
dc.date.issued2023-02-09
dc.identifierArbizu, C. I.; Ferro-Mauricio, R. D.; Chávez-Galarza, J. C.; Vásquez, H. V.; Maicelo, J. L.; Poemape, C.; ... & Corredor, F. A. (2022). The complete mitochondrial genome of a Peruvian creole cattle (Bos taurus) and its phylogenetic analysis. In Veerkamp, R.F.; & De Haas Y. (Eds.), Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP) Technical and species orientated innovations in animal breeding, and contribution of genetics to solving societal challenges. Wageningen Academic Publishers, 1114-1117. doi: 10.3920/978-90-8686-940-4_264
dc.identifier978-90-8686-940-4
dc.identifierhttps://hdl.handle.net/20.500.12955/2255
dc.identifierhttps://doi.org/10.3920/978-90-8686-940-4_264
dc.identifier.urihttps://repositorioslatinoamericanos.uchile.cl/handle/2250/9389960
dc.description.abstractThe population of Peruvian creole cattle (PCC) is decreasing mainly due to the introduction of more productive breeds in recent years. We report the complete mitochondrial genome sequence of a PCC bull for the first time. This genome was 16,339 bp in length with the base composition 31.43% A, 28.64% T, 26.81% C, and 13.12% G. It contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and a control region. Among the 37 genes, 28 were positioned on the H-strand and 9 were positioned on the L-strand. The most frequently used codons were CUA (Leucine), AUA (Isoleucine), AUU (Isoleucine), AUC (Isoleucine) and ACA (Threonine). Maximum likelihood analysis clearly demonstrated that PCC are strongly related to a native African breed, giving insights into the maternal ancestry of PCC. The annotated mitochondrial genome of PCC would serve as an important genetic data set for further breeding work and conservation strategies.
dc.languageeng
dc.publisherWageningen Academic Publishers
dc.publisherNL
dc.rightshttps://creativecommons.org/licenses/by/4.0/
dc.rightsinfo:eu-repo/semantics/openAccess
dc.sourceInstituto Nacional de Innovación Agraria
dc.sourceRepositorio Institucional - INIA
dc.subjectMitocondrial
dc.subjectGenome
dc.subjectCattle
dc.subjectBos Taurus
dc.subjectPhylogenetic analysis
dc.titleThe complete mitochondrial genome of a Peruvian creole cattle (Bos taurus) and its phylogenetic analysis
dc.typeinfo:eu-repo/semantics/conferenceObject


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