De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response

dc.creatorGarcía, Carlos Fernando
dc.creatorPedrini, Nicolás
dc.creatorSánchez Paz, Arturo
dc.creatorReyna Blanco, Carlos S.
dc.creatorLavarías, Sabrina María Luisa
dc.creatorMuhlia Almazán, Adriana
dc.creatorFernández Giménez, Analía
dc.creatorLaino, Aldana
dc.creatorde la Re Vega, Enrique
dc.creatorLukaszewicz, Germán
dc.creatorLópez Zavala, Alonso A.
dc.creatorBrieba, Luis G.
dc.creatorCriscitello, Michael F.
dc.creatorCarrasco Miranda, Jesús S.
dc.creatorGarcía Orozco, Karina D.
dc.creatorOchoa Leyva, Adrián
dc.creatorRudiño Piñera, Enrique
dc.creatorSanchez Flores, Alejandro
dc.creatorSotelo Mundo, Rogerio R.
dc.date2018
dc.date2021-05-28T18:36:14Z
dc.date.accessioned2023-07-15T01:52:20Z
dc.date.available2023-07-15T01:52:20Z
dc.identifierhttp://sedici.unlp.edu.ar/handle/10915/119461
dc.identifierissn:1874-7787
dc.identifier.urihttps://repositorioslatinoamericanos.uchile.cl/handle/2250/7459916
dc.descriptionPalaemonetes argentinus, an abundant freshwater prawn species in the northern and central region of Argentina, has been used as a bioindicator of environmental pollutants as it displays a very high sensitivity to pollutants exposure. Despite their extraordinary ecological relevance, a lack of genomic information has hindered a more thorough understanding of the molecular mechanisms potentially involved in detoxification processes of this species. Thus, transcriptomic profiling studies represent a promising approach to overcome the limitations imposed by the lack of extensive genomic resources for P. argentinus, and may improve the understanding of its physiological and molecular response triggered by pollutants. This work represents the first comprehensive transcriptome-based characterization of the non-model species P. argentinus to generate functional genomic annotations and provides valuable resources for future genetic studies. Trinity de novo assembly consisted of 24,738 transcripts with high representation of detoxification (phase I and II), anti-oxidation, osmoregulation pathways and DNA replication and bioenergetics. This crustacean transcriptome provides valuable molecular information about detoxification and biochemical processes that could be applied as biomarkers in further ecotoxicology studies.
dc.descriptionInstituto de Investigaciones Bioquímicas de La Plata
dc.descriptionInstituto de Limnología "Dr. Raúl A. Ringuelet"
dc.formatapplication/pdf
dc.format74-81
dc.languageen
dc.rightshttp://creativecommons.org/licenses/by-nc-sa/4.0/
dc.rightsCreative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.subjectBioquímica
dc.subjectZoología
dc.subjectPalaemonetes Argentinus
dc.subjectShrimp
dc.subjectPrawn
dc.subjectTranscriptome
dc.subjectDetoxification
dc.subjectCrustacea
dc.titleDe novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response
dc.typeArticulo
dc.typePreprint


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