dc.creatorGomes, Thiago C F
dc.creatorSkaf, Munir S
dc.date2012-May
dc.date2015-11-27T13:28:18Z
dc.date2015-11-27T13:28:18Z
dc.date.accessioned2018-03-29T01:14:58Z
dc.date.available2018-03-29T01:14:58Z
dc.identifierJournal Of Computational Chemistry. v. 33, n. 14, p. 1338-46, 2012-May.
dc.identifier1096-987X
dc.identifier10.1002/jcc.22959
dc.identifierhttp://www.ncbi.nlm.nih.gov/pubmed/22419406
dc.identifierhttp://repositorio.unicamp.br/jspui/handle/REPOSIP/199910
dc.identifier22419406
dc.identifier.urihttp://repositorioslatinoamericanos.uchile.cl/handle/2250/1300143
dc.descriptionCellulose-builder is a user-friendly program that builds crystalline structures of cellulose of different sizes and geometries. The program generates Cartesian coordinates for all atoms of the specified structure in the Protein Data Bank format, suitable for using as starting configurations in molecular dynamics simulations and other calculations. Crystalline structures of cellulose polymorphs Iα, Iβ, II, and III(I) of practically any size are readily constructed which includes parallelepipeds, plant cell wall cellulose elementary fibrils of any length, and monolayers. Periodic boundary conditions along the crystallographic directions are easily imposed. The program also generates atom connectivity file in PSF format, required by well-known simulation packages such as NAMD, CHARMM, and others. Cellulose-builder is based on the Bash programming language and should run on practically any Unix-like platform, demands very modest hardware, and is freely available for download from ftp://ftp.iqm.unicamp.br/pub/cellulose-builder.
dc.description33
dc.description1338-46
dc.languageeng
dc.relationJournal Of Computational Chemistry
dc.relationJ Comput Chem
dc.rightsfechado
dc.rightsCopyright © 2012 Wiley Periodicals, Inc.
dc.sourcePubMed
dc.subjectCellulose
dc.subjectCrystallization
dc.subjectHydrophobic And Hydrophilic Interactions
dc.subjectModels, Molecular
dc.subjectMolecular Conformation
dc.subjectSoftware
dc.titleCellulose-builder: A Toolkit For Building Crystalline Structures Of Cellulose.
dc.typeArtículos de revistas


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