Endosperm-preferred Expression Of Maize Genes As Revealed By Transcriptome-wide Analysis Of Expressed Sequence Tags.

dc.creatorVerza, Natalia C
dc.creatorE Silva, Thaís Rezende
dc.creatorNeto, Germano Cord
dc.creatorNogueira, Fábio T S
dc.creatorFisch, Paulo H
dc.creatorde Rosa, Vincente E
dc.creatorRebello, Marcelo M
dc.creatorVettore, André L
dc.creatorda Silva, Felipe Rodrigues
dc.creatorArruda, Paulo
dc.date2005-Sep
dc.date2015-11-27T13:02:31Z
dc.date2015-11-27T13:02:31Z
dc.date.accessioned2018-03-29T01:01:37Z
dc.date.available2018-03-29T01:01:37Z
dc.identifierPlant Molecular Biology. v. 59, n. 2, p. 363-74, 2005-Sep.
dc.identifier0167-4412
dc.identifier10.1007/s11103-005-8924-7
dc.identifierhttp://www.ncbi.nlm.nih.gov/pubmed/16247562
dc.identifierhttp://repositorio.unicamp.br/jspui/handle/REPOSIP/196459
dc.identifier16247562
dc.identifier.urihttp://repositorioslatinoamericanos.uchile.cl/handle/2250/1296692
dc.descriptionThe transcriptome-wide endosperm-preferred expression of maize genes was addressed by analyzing a large database of expressed sequence tags (ESTs). We generated 30,531 high quality sequence-reads from the 5'-ends of cDNA libraries from maize endosperm harvested at 10, 15, and 20 days after pollination. A further 196,900 maize sequence-reads retrieved from public databases were added to this endosperm collection to generate MAIZEST, a database with tools for data storage and analysis. MAIZEST contains 227,431 ESTs, one third of which represents developing endosperm and the remaining two-thirds represent transcripts from 49 cDNA libraries constructed from different organs and tissues. Assembling the MAIZEST ESTs generated 29,206 putative transcripts, of which a set of 4032 assembled sequences was composed exclusively of sequences derived from endosperm cDNA libraries. After sequence analysis using overlapping parameters, a sub-set of 2403 assembled sequences was functionally annotated and revealed a wide variety of putative new genes involved in endosperm development and metabolism.
dc.description59
dc.description363-74
dc.languageeng
dc.relationPlant Molecular Biology
dc.relationPlant Mol. Biol.
dc.rightsfechado
dc.rights
dc.sourcePubMed
dc.subjectExpressed Sequence Tags
dc.subjectGene Expression Profiling
dc.subjectGene Expression Regulation, Developmental
dc.subjectGene Expression Regulation, Plant
dc.subjectPlant Proteins
dc.subjectPlant Roots
dc.subjectSeedling
dc.subjectSeeds
dc.subjectTranscription, Genetic
dc.subjectZea Mays
dc.titleEndosperm-preferred Expression Of Maize Genes As Revealed By Transcriptome-wide Analysis Of Expressed Sequence Tags.
dc.typeArtículos de revistas


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