Identification and in silico expression pattern analysis of Eucalyptus expressed sequencing tags (ESTs) encoding molecular chaperones

dc.creatorCagliari, TC
dc.creatorTiroli, AO
dc.creatorBorges, JC
dc.creatorRamos, CHI
dc.date2005
dc.date2014-11-14T23:22:08Z
dc.date2015-11-26T16:08:55Z
dc.date2014-11-14T23:22:08Z
dc.date2015-11-26T16:08:55Z
dc.date.accessioned2018-03-28T22:57:30Z
dc.date.available2018-03-28T22:57:30Z
dc.identifierGenetics And Molecular Biology. Soc Brasil Genetica, v. 28, n. 3, n. 520, n. 528, 2005.
dc.identifier1415-4757
dc.identifierWOS:000204389800006
dc.identifier10.1590/S1415-47572005000400006
dc.identifierhttp://www.repositorio.unicamp.br/jspui/handle/REPOSIP/69118
dc.identifierhttp://www.repositorio.unicamp.br/handle/REPOSIP/69118
dc.identifierhttp://repositorio.unicamp.br/jspui/handle/REPOSIP/69118
dc.identifier.urihttp://repositorioslatinoamericanos.uchile.cl/handle/2250/1266484
dc.descriptionFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
dc.descriptionConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.descriptionExpressed Sequence Tags (ESTs) sequencing provides reliable and useful information concerning gene expression patterns in the genomic context. Our group used bioinformatics to identify and annotate 5'EST-contigs belonging to the molecular chaperones within the Eucalyptus Genome Sequencing Project Consortium (FORESTs) database. We found that 1,959 5'EST-contigs, or approximately 1.6% of the total 5'EST-contigs, encoded chaperones, emphasizing their biological importance. About 55% of the chaperones that we found were Hsp70 chaperones and its co-chaperones, 18% were Hsp90 chaperones, 15% were Hsp60 and its co-chaperone, 8% were Hsp100 chaperones, and 4% were Small Hsps. We also investigated the digital expression profile of the chaperone genes to gain information on gene expression levels in the different libraries and we found that molecular chaperones may have differential expression. The results discussed here give important hints about the role of chaperones in Eucalyptus cells.
dc.description28
dc.description3
dc.descriptionS
dc.description520
dc.description528
dc.descriptionFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
dc.descriptionConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.descriptionFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
dc.descriptionConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.languageen
dc.publisherSoc Brasil Genetica
dc.publisherRibeirao Pret
dc.publisherBrasil
dc.relationGenetics And Molecular Biology
dc.relationGenet. Mol. Biol.
dc.rightsaberto
dc.sourceWeb of Science
dc.subjectchaperones
dc.subjectheat shock proteins
dc.subjectgenome
dc.subjectexpressed sequence tags
dc.titleIdentification and in silico expression pattern analysis of Eucalyptus expressed sequencing tags (ESTs) encoding molecular chaperones
dc.typeArtículos de revistas


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