Artículos de revistas
Molecular Analysis Of Microbial Diversity In Corrosion Samples From Energy Transmission Towers
Registro en:
Biofouling. , v. 27, n. 4, p. 435 - 447, 2011.
8927014
10.1080/08927014.2011.581751
2-s2.0-79956114851
Autor
Oliveira V.M.
Lopes-Oliveira P.F.
Passarini M.R.Z.
Menezes C.B.A.
Oliveira W.R.C.
Rocha A.J.
Sette L.D.
Institución
Resumen
Microbial diversity in corrosion samples from energy transmission towers was investigated using molecular methods. Ribosomal DNA fragments were used to assemble gene libraries. Sequence analysis indicated 10 bacterial genera within the phyla Proteobacteria, Firmicutes, Actinobacteria and Bacteroidetes. In the two libraries generated from corroded screw-derived samples, the genus Acinetobacter was the most abundant. Acinetobacter and Clostridium spp. dominated, with similar percentages, in the libraries derived from corrosion scrapings. Fungal clones were affiliated with 14 genera belonging to the phyla Ascomycota and Basidiomycota; of these, Capnobotryella and Fellomyces were the most abundant fungi observed. Several of the microorganisms had not previously been associated with biofilms and corrosion, reinforcing the need to use molecular techniques to achieve a more comprehensive assessment of microbial diversity in environmental samples. © 2011 Taylor & Francis. 27 4 435 447 Amann, R.I., Ludwig, W., Schleifer, K., Phylogenetic identification and in situ detection of individual microbial cells without cultivation (1995) Microbiol Rev, 59, pp. 143-169 Asaulenko, L.H., Abdulina, D.R., Purish, L.M., Taxonomic position of certain representatives of sulphate-reducing corrosive microbial community (2010) Mikrobiol Z, 72, pp. 3-10 Beech, I.B., Gaylarde, C.C., Recent advances in the study of biocorrosion-an overview (1999) Rev Microbiol, 30, pp. 177-190 Bermont-Bouis, D., Janvier, M., Grimont, P.A., Dupont, I., Vallaeys, T., Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel (2007) J Appl Microbiol, 102, pp. 161-168 Borenstein, S.W., (1994) Microbially influenced corrosion handbook, p. 288. , 5th ed. Cambridge, (UK): Woodhead Publishing Limited Broda, D.M., Saul, D.J., Bell, R.G., Musgrave, D.R., Clostridium algidixylanolyticum sp. nov., a psychrotolerant, xylan-degrading, spore-forming bacterium (2000) Evol Microbiol, 50, pp. 623-631 Chao, A., Non-parametric estimation of the number of classes in a population (1984) Scand Stat Theory Appl, 11, pp. 783-791 Chao, A., Ma, M.C., Yang, M.C.K., Stopping rules and estimation for recapture debugging with unequal failure rates (1993) Biometrika, 80, pp. 193-201 Chun, J., (1995) Computer-assisted classification and identification of Actinomycetes, , [PhD Thesis]. Newcastle upon Tyne (UK): University of Newcastle upon Tyne Colwell, R.K., Coddington, J.A., Estimating terrestrial biodiversity through extrapolation (1994) Philos T Roy Soc Lond B, 345, pp. 101-118 Cragnolino, G., Tuovinen, O.H., The role of sulfatereducing and sulfur-oxidising bacteria in the localized corrosion of iron-based alloys (1984) Int Biodeterior, 20, pp. 9-18 Dickinson, W., Lewandowski, Z., Manganese biofouling and corrosion behaviour of stainless steel (1996) Biofouling, 10, pp. 79-93 Duan, J., Wu, S., Zhang, X., Huang, G., Du, M., Hou, B., Corrosion of carbon steel influenced by anaerobic biofilm in natural seawater (2008) Electrochim Acta, 54, pp. 22-28 Emde, K.M.E., Smith, D.W., Facey, R., Initial investigation of microbially influenced corrosion (MIC) in a low temperature water distribution system (1992) Water Res, 26, pp. 169-175 Ewing, B., Hillier, L., Wendl, M., Green, P., Basecalling of automated sequencer traces using phred. I. Accuracy assessment (1998) GenomeRes, 8, pp. 175-185 Flemming, H.C., Biofouling and microbiologically influenced corrosion (MIC)-an economical and technical overview (1996) Microbial deterioration of materials, pp. 5-14. , In: Heitz E, Sand W, Flemming HC, editors., Heidelberg (Germany): Springer Furuhata, K., Ishizaki, N., Kawakami, Y., Fukuyama, M., Bacterial contamination of stock solutions in storage cases for contact lens, and the disinfectant-resistance of isolates (2010) Biocontrol Sci, 15, pp. 81-85 Gao, Z., Li, B., Zheng, C., Wang, G., Molecular detection of fungal communities in the Hawaiian marine sponges Suberites zeteki and Mycale armata (2008) Appl Environ Microbiol, 19, pp. 6091-6101 Gordon, D., Abajian, C., Green, P., Consed: A graphical tool for sequence finishing (1998) Genome Res, 8, pp. 195-202 Grobkopf, R., Stubner, S., Liesack, W., Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms (1998) Appl Environ Microbiol, 64, pp. 960-969 Hagenauer, A., Hilpert, R., Hack, T., Microbiological investigation of corrosion damages in aircraft (1994) Werkst Korros, 45, pp. 355-360 Hamilton, W.A., Sulphate reducing bacteria and anaerobic corrosion (1985) Ann Rev Microbiol, 39, pp. 195-217 Herzog, P., Winkler, I., Wolking, D., Kämpfer, P., Lipski, A., Chryseobacterium ureilyticum sp. nov., Chryseobacterium gambrini sp. nov., Chryseobacterium pallidum sp. nov. and Chryseobacterium molle sp. nov., isolated from beerbottling plants (2008) Int J Syst Evol Microbiol, 58, pp. 26-33 Hughes, J.B., Hellmann, J.J., Ricketts, T.H., Bohannan, B.J.M., Counting the uncountable: Statistical approaches to estimating microbial diversity (2001) Appl Environ Microbiol, 67, pp. 4399-4406 Iyer, P., Bruns, M.A., Zhang, H., van Ginkel, S., Logan, B.E., H2-produncing bacterial communities from a heat-treated soil inoculums (2004) Appl Microbiol Biotechnol, 66, pp. 166-173 Jan-Roblero, J., Romero, J.M., Amaya, M., le Borgne, S., Phylogenetic characterization of corrosive consortium isolated from a sour gas pipelines (2004) Appl Microbiol Biotechnol, 64, pp. 862-867 Jan-Roblero, J., Posadas, A., de la Serna, J.Z.D., García, R., Hernández-Rodrígues, C., Phylogenetic characterization of bacterial consortia obtained of corroding gas pipelines in Mexico (2008) World J Microbiol Biotechnol, 24, pp. 1775-1784 Jung, G.Y., Kim, J.R., Park, J.Y., Park, S., Hydrogen production by a new chemoheterotrophic bacterium Citrobacter spY19 (2002) Int J Hydrogen Energy, 27, pp. 260-610 Juzeliûnas, E., Ramanauskas, R., Lugauskas, A., Samuleviciene, M., Konstantinas, L., Microbially influenced corrosion acceleration and inhibition. EIS study of Zn and Al subjected for two years to influence of Penicillium frequentans, Aspergillus niger and Bacillus mycoides (2005) Electrochem Comm, 7, pp. 305-311 Juzeliûnas, E., Ramanauskas, R., Lugauskas, A., Leinartas, K., Samuleviciene, M., Sudavicius, A., Juskenas, R., Microbially influenced corrosion of zinc and aluminium-two-year subjection to influence of Aspergillus niger (2007) Corros Sci, 49, pp. 4098-4112 Kimura, M., A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences (1980) Mol Biol Evol, 16, pp. 111-120 Kjeldsen, K.U., Kjellerup, B.V., Egli, K., FrOlund, B., Nielsen, P.H., Ingvorsen, K., Phylogenetic and functional diversity of bacteria in biofilms from metal surfaces of an alkaline district heating system (2007) FEMS Microbiol Ecol, 61, pp. 384-397 Kjellerup, B.V., Veeh, R.H., Sumithraratne, P., Thomsen, T.R., Buckingham-Meyer, K., Frolund, B., Sturman, P., Monitoring of microbial souring in chemically treated, produced-water biofilm systems using molecular techniques (2005) J Ind Microbiol Biotechnol, 32, pp. 163-170 Koch, G.H., Brongers, M.P.H., Thompson, N.G., Virmani, Y.P., Payer, J.H., (2002) Corrosion costs and preventive strategies in the United States, , Report No. FHWA-RD-01-156. McLean (VA): Federal Highway Administration, US Department of Transportation Lane, D., 16S/23S rRNA sequencing (1991) Nucleic acid techniques in bacterial systematics, pp. 115-175. , In: Stackebrandt E, Goodfellow M, editors., New York (NY): John Wiley and Sons Leahy, J.A., Byrne, A., Olsen, R., Comparison of factors influencing trichloroethylene degradation by tolueneoxidizing bacteria (1996) Appl Environ Microbial, 62, pp. 825-833 LeChevallier, M.W., Cawthon, C.D., Lee, R.G., Factors promoting survival of bacteria in chlorinated water supplies (1988) Appl Environ Microbiol, 54, pp. 649-654 Lee, S.D., Phycicoccus jejuensis gen. nov., sp. nov., an actinomycete isolated from seaweed (2006) Int J Syst Evol Microbiol, 56, pp. 2369-2373 Little, B.J., Lee, J.S., Microbiologically influenced corrosion (2007) Kirk-Othmer Encyclopedia of Chemical Technology, p. 42. , In, New Jersey (NY): John Wiley and Sons López, M.A., de la Serna, F.J.Z.D., Jan-Roblero, J., Romero, J.M., Hernández-Rodríguez, C., Phylogenetic analysis of a biofilm bacterial population in a water pipeline in the Gulf of Mexico (2006) FEMS Microbiol Ecol, 58, pp. 145-154 Magot, M., Ravot, G., Campaignolle, X., Ollivier, B., Patel, B.K.C., Fardeau, M.L., Thomas, P., Garcia, J.L., Dethiosulfovibrio peptidovorans gen. nov., sp. nov., a new anaerobic, slightly halophilic, thiosulfate-reducing bacterium from corroding offshore oil wells (1997) Int J Syst Bacteriol, 47, pp. 818-824 Magurran, A.E., (2004) Measuring biological diversity, p. 256. , Oxford (UK): Blackwell Publishing. ISBN 0-632-05633-9 Neria-Gonzáles, I., Wang, E.T., Ramírez, F., Romero, J.M., Hernández-Rodríguez, C., Characterization of bacterial community associated to biofilms of corroded oil pipelines from southeast of Mexico (2006) Anaerobe, 12, pp. 122-133 Nyc, O., Matejková, J., Stenotrophomonas maltophilia: Significant contemporary hospital pathogen-review (2010) Folia Microbiol, 55, pp. 286-294 Obuekwe, C.O., Westlake, D.W.S., Plambeck, J.A., Cook, F.D., Corrosion of mild steel in cultures of ferric iron reducing bacterium isolated from crude oil: Polarization characteristics (1981) Corrosion, 37, pp. 461-467 Oppong, D., King, V.M., Bowen, J.A., Isolation and characterization of filamentous bacteria from paper mill slimes (2003) Int Biodeterior Biodegr, 52, pp. 53-62 Page, S., Gaylarde, C.C., Biocide activity against Legionella and Pseudomonas (1990) Int Biodeterior, 26, pp. 139-148 Prillinger, H., Kraepelin, G., Lopandic, K., Schweigkofler, W., Molnar, O., Weigang, F., Dreyfuss, M.M., New species of Fellomyces isolated from epiphytic lichen species (1997) Syst Appl Microbiol, 20, pp. 572-574 Rajasekar, A., Maruthamuthu, S., Palaniswamy, N., Rajendran, A., Biodegradation of corrosion inhibitors and their influence on petroleum product pipeline (2006) Microbiol Res, 162, pp. 355-368 Rajasekar, A., Anandkumar, B., Maruthamuthu, S., Ting, Y.P., Rahman, P.K.S.M., Characterization of corrosive bacterial consortia isolated from petroleum-producttransporting pipelines (2010) Appl Microbiol Biotechnol, 85, pp. 1175-1188 Rajasekar, A., Babu, T.G., Pandian, S.T., Maruthamuthu, S., Palaniswamy, N., Rajendran, A., Role of Serratia marcescens ACE2 on diesel degradation and its influence on corrosion (2007) J Ind Microbiol Biotechnol, 34, pp. 589-598 Ramanauskas, R., Juzeliûnas, E., Narkevièius, A., Buèinskiene, D., Lugauskas, A., Peèiulyte, D., Levinskaite, L., Jasinevièiene, D., Investigation of microbiologically influenced corrosion (2005) Chemija, 1, pp. 25-34 Ryan, R.P., Monchy, S., Cardinale, M., Taghavi, S., Crossman, L., Avison, M.B., Berg, G., Dow, J.M., The versatility and adaptation of bacteria from the genus Stenotrophomonas (2009) Nature, 7, pp. 514-525 Saitou, N., Nei, M., The neighbor-joining method: A new method for reconstructing phylogenetic trees (1987) Mol Biol Evol, 4, pp. 406-425 Sambrook, J., Fritschi, E.F., Maniatis, T., (1989) Molecular cloning: A laboratory manual, p. 396. , 2nd ed. Cold Spring Harbor (NY): Cold Spring Laboratory Press Schabereiter-Gurtner, C., Pinar, G., Lubitz, W., Rolleke, S., Analysis of fungal communities on historical church window glass by denaturing gradient gel electrophoresis and phylogenetic 18S rDNA sequence analysis (2001) J Microbiol Methods, 47, pp. 345-354 Schloss, P.D., Handelsman, J., Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness (2005) Appl Environ Microbiol, 71, pp. 1501-1506 Sert, H.B., Sümbül, H., Sterflinger, K., A new species of Capnobotryella from monument surfaces (2007) Mycol Res, 111, pp. 1235-1241 Sert, H.B., Sümbül, H., Sterflinger, K., Sarcinomyces sideticae, a new black yeast fromhistorical marble monuments in Side (Antalya, Turkey) (2007) Bot J Linn Soc, 154, pp. 373-380 Sette, L.D., Passarini, M.R.Z., Rodrigues, A., Leal, R.R., Simioni, K.C.M., Nobre, F.S., Brito, B.R., Pagnocca, F.C., Fungal diversity associated with Brazilian energy transmission towers (2010) Fungal Divers, 44, pp. 53-63 Smirnov, V.F., Belov, D.V., Sokolova, T.N., Kuzina, O.V., Kartashov, V.R., Microbiological corrosion of aluminum alloys (2008) Appl Biochem Microbiol, 44, pp. 192-196 Soracco, R.J., Pope, D.H., Eggers, J.M., Effinger, T.N., Microbiologically influenced corrosion investigations in electric power generating stations (1988) Proceedings of Corrosion '88, pp. 1-16. , Paper 83. Houston (TX): NACE International Sterflinger, K., de Baere, R., de Hoog, G.S., de Wachter, R., Krumbein, W.E., Haase, G., Coniosporium perforansand C. apollinis, two new rock-inhabiting fungi isolated from marble in the Sanctuary of Delos (Cyclades, Greece) (1997) Antonie van Leeuwenhoek, 72, pp. 349-363 Tamura, K., Dudley, J., Nei, M., Kumar, S., MEGA 4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 (2007) Mol Biol Evol, 24, pp. 1596-1599 Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., Higgins, D.G., The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools (1997) Nucleic Acids Res, 24, pp. 4876-4882 Tiirola, M., Lahtinen, T., Vuento, M., Oker-Blom, C., Early succession of bacterial biofilms in paper machines (2009) J Ind Microbiol Biotechnol, 36, pp. 929-937 Torsvik, V., Ovreas, L., Microbial diversity and function in soil: From genes to ecosystems (2002) Curr Opin Microbiol, 5, pp. 240-245 Vetting, M.W., Dargenio, D.A., Ornston, L.N., Ohlendorf, D.H., Structure of Acinetobacterstrain ADP1 protocatechuate 3,4-dioxygenase at 2.2 Åresolution: Implications for the mechanism of an intradiol dioxygenase (2000) Biochemistry, 39, pp. 7943-7955 Videla, H.A., Characklis, W.G., Biofouling and microbially influenced corrosion (1992) Int Biodeterior Biodegr, 29, pp. 195-207 Voordouw, G.J.K., Voordouw, T.R., Jack, J., Foght, P., Fedorak, M., Westlake, D.W.S., Identification of distinct communities of sulfate reducing bacteria in oil fields by reverse sample genome probing (1992) Appl Environ Microbiol, 58, pp. 3542-3552 Weon, H.Y., Yoo, S.H., Kim, B.Y., Schumann, P., Kroppenstedt, R.M., Hong, S.K., Kwon, S.W., Phycicoccus aerophilus sp. nov., isolated from air (2008) Int J Syst Evol Microbiol, 58, pp. 2389-2392 Wollenzien, U., de Hoog, G.S., Krumbein, W.E., Uijthof, J.M., Sarcinomyces petricola, a new microcolonial fungus from marble in the Mediterranean basin (1997) Antonie van Leeuwenhoek, 71, pp. 281-288 Yoon, J.H., Lee, S.Y., Kang, S.J., Oh, T.K., Phycicoccus dokdonensis sp. nov., isolated from soil (2008) Int J Syst Evol Microbiol, 58, pp. 597-600 Zhang, T., Fang, H.H.P., Phylogenetic diversity of a SRBrich marine biofilm (2001) Appl Microbiol Biotechnol, 57, pp. 437-440 Zhang, T., Liu, H., Fang, H.H.P., Biohydrogen production from starch in wastewater under thermophilic condition (2003) J Environ Manage, 69, pp. 149-156 Zhou, J., Xia, B., Treves, D.S., Wu, L.Y., Marsh, T.L., Oneill, R.V., Palumbo, A.V., Tiedje, J.M., Spatial and resource factors influencing high microbial diversity in soil (2002) Appl Environ Microbiol, 61, pp. 326-334 Zhu, X.Y., Lubeck, J., Kilbane, J.J., Characterization of microbial communities in gas industry pipelines (2003) Appl Environ Microbiol, 69, pp. 5354-5363