The Sugarcane Genome Challenge: Strategies For Sequencing A Highly Complex Genome

dc.creatorSouza G.M.
dc.creatorBerges H.
dc.creatorBocs S.
dc.creatorCasu R.
dc.creatorD'Hont A.
dc.creatorFerreira J.E.
dc.creatorHenry R.
dc.creatorMing R.
dc.creatorPotier B.
dc.creatorVan Sluys M.-A.
dc.creatorVincentz M.
dc.creatorPaterson A.H.
dc.date2011
dc.date2015-06-30T20:22:54Z
dc.date2015-11-26T14:48:34Z
dc.date2015-06-30T20:22:54Z
dc.date2015-11-26T14:48:34Z
dc.date.accessioned2018-03-28T21:59:23Z
dc.date.available2018-03-28T21:59:23Z
dc.identifier
dc.identifierTropical Plant Biology. , v. 4, n. 03/04/15, p. 145 - 156, 2011.
dc.identifier19359756
dc.identifier10.1007/s12042-011-9079-0
dc.identifierhttp://www.scopus.com/inward/record.url?eid=2-s2.0-82355173420&partnerID=40&md5=00c8b67288b2133b0e8e22de48eda3a5
dc.identifierhttp://www.repositorio.unicamp.br/handle/REPOSIP/107731
dc.identifierhttp://repositorio.unicamp.br/jspui/handle/REPOSIP/107731
dc.identifier2-s2.0-82355173420
dc.identifier.urihttp://repositorioslatinoamericanos.uchile.cl/handle/2250/1253651
dc.descriptionSugarcane cultivars derive from interspecific hybrids obtained by crossing Saccharum officinarum and Saccharum spontaneum and provide feedstock used worldwide for sugar and biofuel production. The importance of sugarcane as a bioenergy feedstock has increased interest in the generation of new cultivars optimised for energy production. Cultivar improvement has relied largely on traditional breeding methods, which may be limited by the complexity of inheritance in interspecific polyploid hybrids, and the time-consuming process of selection of plants with desired agronomic traits. In this sense, molecular genetics can assist in the process of developing improved cultivars by generating molecular markers that can be used in the breeding process or by introducing new genes into the sugarcane genome. For meeting each of these, and additional goals, biotechnologists would benefit from a reference genome sequence of a sugarcane cultivar. The sugarcane genome poses challenges that have not been addressed in any prior sequencing project, due to its highly polyploid and aneuploid genome structure with a complete set of homeologous genes predicted to range from 10 to 12 copies (alleles) and to include representatives from each of two different species. Although sugarcane's monoploid genome is about 1 Gb, its highly polymorphic nature represents another significant challenge for obtaining a genuine assembled monoploid genome. With a rich resource of expressed-sequence tag (EST) data in the public domain, the present article describes tools and strategies that may aid in the generation of a reference genome sequence. © 2011 Springer Science+Business Media, LLC.
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dc.description03/04/15
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dc.languageen
dc.publisher
dc.relationTropical Plant Biology
dc.rightsfechado
dc.sourceScopus
dc.titleThe Sugarcane Genome Challenge: Strategies For Sequencing A Highly Complex Genome
dc.typeArtículos de revistas


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