Artículos de revistas
Bioremediation Potential Of Microorganisms Derived From Petroleum Reservoirs
Registro en:
Marine Pollution Bulletin. Elsevier Ltd, v. 89, n. 01/02/15, p. 191 - 200, 2014.
0025326X
10.1016/j.marpolbul.2014.10.003
2-s2.0-84913596197
Autor
Dellagnezze B.M.
de Sousa G.V.
Martins L.L.
Domingos D.F.
Limache E.E.G.
de Vasconcellos S.P.
da Cruz G.F.
de Oliveira V.M.
Institución
Resumen
Bacterial strains and metagenomic clones, both obtained from petroleum reservoirs, were evaluated for petroleum degradation abilities either individually or in pools using seawater microcosms for 21. days. Gas Chromatography-Flame Ionization Detector (GC-FID) and Gas Chromatography-Mass Spectrometry (GC-MS) analyses were carried out to evaluate crude oil degradation. The results showed that metagenomic clones 1A and 2B were able to biodegrade n-alkanes (C14 to C33) and isoprenoids (phytane and pristane), with rates ranging from 31% to 47%, respectively. The bacteria Dietzia maris CBMAI 705 and Micrococcus sp. CBMAI 636 showed higher rates reaching 99% after 21. days. The metagenomic clone pool biodegraded these compounds at rates ranging from 11% to 45%. Regarding aromatic compound biodegradation, metagenomic clones 2B and 10A were able to biodegrade up to 94% of phenanthrene and methylphenanthrenes (3-MP, 2-MP, 9-MP and 1-MP) with rates ranging from 55% to 70% after 21. days, while the bacteria Dietzia maris CBMAI 705 and Micrococcus sp. CBMAI 636 were able to biodegrade 63% and up to 99% of phenanthrene, respectively, and methylphenanthrenes (3-MP, 2-MP, 9-MP and 1-MP) with rates ranging from 23% to 99% after 21. days. In this work, isolated strains as well as metagenomic clones were capable of degrading several petroleum compounds, revealing an innovative strategy and a great potential for further biotechnological and bioremediation applications. 89 01/02/15 191 200 Asif, M., Grice, K., Fazeelat, T., Assessment of petroleum biodegradation using stable hydrogen isotopes of individual saturated hydrocarbon and polycyclic aromatic hydrocarbon distributions in oils from the Upper Indus Basin, Pakistan (2009) Org. Geochem., 40, pp. 301-311 Bamforth, S.M., Singleton, I., Review: Bioremediation of polycyclic aromatic hydrocarbons: current knowledge and future directions (2005) J. Chem. Technol. Biotechnol., 80, pp. 723-736 Banat, I.M., Franzetti, A., Gandolfi, I., Bestetti, G., Martinotti, M.G., Fracchia, L., Smyth, T.J., Marchant, R., MINI-REVIEW: Microbial biosurfactants production, applications and future potential (2010) Appl. Microbiol. Biotechnol., 87, pp. 427-444 Bao, M., Sun, P., Yang, X., Wang, X., Wang, L., Cao, L., Li, F., (2014) Biodegradation of Marine Surface Floating Crude Oil in a Large-scale Field Simulated Experiment, , http://dx.doi.org/10.1039/c4em00166d, Processes & Impacts: Environmental Science Bellicanta, G.S., Diversity of catabolic genes in sediment samples of Santos and São Vicente estuarine systems (2005), 5 (2). , SP. Biota Neotrop. [online]Bihari, Z., Szvetnik, A., Szabo, Z., Blastyak, A., Zombori, Z., Balázs, M., Kiss, I., Functional analysis of long-chain n-alkane degradation by Dietzia spp (2011) FEMS Microbiol. Lett., 316, pp. 100-107 Biver, S., Vandenbol, M., Characterization of three new carboxylic ester hydrolases isolated by functional screening of a forest soil metagenomic library (2013) J. Ind. Microbiol. Biotechnol., 40, pp. 191-200 Bødtker, G., Hvidsten, I.V., Barth, T., Torsvik, T., Hydrocarbon degradation by Dietzia sp. A14101 isolated from an oil reservoir model column (2009) Antonie Van Leeuwenhoek, 96, pp. 459-469 Borzenkov, I.A., Milekhina, E.I., Gotoeva, M.T., Rozanova, E.P., Beliaev, S.S., (2006) Mikrobiologia, 75, p. 82 Calvo, C., Manzanera, M., Silva-Castro, G.A., Uad, I., González-López, J., Application of bioemulsifiers in soil oil bioremediation processes. Future prospects (2009) Sci. Total Environ., 407, pp. 3634-3640 Cameron, P., Liability for Catastrophic Risk in the oil gas Industry (2012), (6). , International Energy Law ReviewCappello, S., Caruso, G., Zampino, D., Monticelli, L.S., Maimone, G., Denaro, R., Tripodo, B., Giuliano, L., Microbial community dynamics during assays of harbour oil spill bioremediation: a microscale simulation study (2007) J. Appl. Microbiol., 102 (1), pp. 184-194 Carrera-Martínez, D., Mateos-Sanz, A., López-Rodas, V., Costas, E., Microalgae response to petroleum spill: an experimental model analysing physiological and genetic response of Dunaliella tertiolecta (Chlorophyceae) to oil samples from the tanker Prestige (2010) Aquat. Toxicol., 97, pp. 151-159 Cerqueira, V.S., Hollenbach, E.B., Maboni, F., Vainstein, M.H., Camargo, F.A.O., Peralba, M.C.R., Bento, F.M., Biodegradation potential of oily sludge by pure and mixed bacterial cultures (2011) Bioresour. Technol., 102 (23), pp. 11003-11010 Da Cruz, G.F., Santos Neto, E.V., Marsaioli, A.J., Petroleum degradation by aerobic microbiota from the Pampo Sul Oil Field, Campos Basin, Brazil (2008) Org. Geochem., 39, pp. 1204-1209 Da Cruz, G.F., Angolini, C.F.F., Oliveira, L.G., Lopes, P.F., Vasconcellos, S.P., Elaine Crespim, E., Oliveira, V.M., Marsaioli, A.J., Searching for monooxygenases and hydrolases in bacteria from an extreme environment (2010) Appl. Microbiol. Biotechnol., 87, pp. 319-329 DaCruz, G.F., Vasconcellos, S.P., Angolini, C.F.F., Dellagnezze, B.M., Sierra Garcia, I.N., Oliveira, V.M., Santos Neto, E.V., Marsaioli, A.J., Could petroleum biodegradation be a joint achievement of aerobic and anaerobic microrganisms in deep sea reservoirs (2011) AMB Express, 1. , 47le 124 Dellagnezze, B.M., Vasconcellos, S.P., Oliveira, V.M., Bioprospection of genes involved in the synthesis of biosurfactants from petroleum reservoir microbial communities (2010), Master Science thesis, UNICAMPDick, G.J., Anantharaman, K., Baker, B.J., Li, M., Daniel, C., Reed, D.C., Sheik, C.S., The microbiology of deep sea hydrothermal vent plumes: ecological and biogeographic linkages to seafloor and water column habitats (2013) Frontiers Microbiol., 4 Duarte, H.O., Droguett, E.L., Araújo, M., Teixeira, S.F., Quantitative Ecological Risk Assessment of Industrial Accidents: The Case of Oil Ship Transportation in the Coastal Tropical Area of Northeastern Brazil (2013) Human Ecol. Risk Assess., 19, pp. 1457-1476 Durako, M.J., Kenworthy, W.J., Fatemy, S.M.R., Valavi, H., Thayer, G.W., Assessment of the toxicity of Kuwait crude oil on the photosynthesis and respiration of seagrasses of the northern Gulf (1993) Mar. Pollut. Bull., 27, pp. 223-227 Evans, F.F., Rosado, A.S., Sebastian, G.V., Casella, R., Machado, P.L.O.A., Holmstrom, C., Kjelleberg, S., Seldin, L., Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms (2004) FEMS Microbiol. Ecol., 49, pp. 295-305 Faoro, H., Glogauer, A., Souza, E.M., Rigo, L.U., Cruz, L.M., Monteiro, R.A., Pedrosa, F.A., Identification of a new lipase family in the Brazilian Atlantic Forest soil metagenome (2011) Environ. Microbiol. Reports, 3 (6), pp. 750-755 Gharibzahedi, S.M.T., Razavi, S.H., Mousavi, M., Potential applications and emerging trends of species of the genus Dietzia: a review (2013) Ann. Microbiol. Gonzalez, J., Figueiras, F.G., Aranguren-Gassis, M., Crespo, B.G., Fernandez, E., Morán, X.A.G., Nieto-Cid, M., Effect of a simulated oil spill on natural assemblages of marine phytoplankton enclosed in microcosms (2009) Estuar. Coast. Shelf Sci., 83, pp. 265-276 Hassanshahian, M., Ahmadinejad, M., Tebyanian, H., Kariminik, A., Isolation and characterization of alkane degrading bacteria from petroleum reservoir waste water in Iran (Kerman and Tehran provenances) (2013) Mar. Pollut. Bull., 73, pp. 300-305 Jegan, J., Vijayaraghavan, K., Senthilkumar, R., Velan, M., Naphthalene Degradation Kinetics of Micrococcus sp., isolated from activated sludge (2010) CLEAN Soil, Air, Water, 38 (9), pp. 837-842 Kuhn, E., Bellicanta, G.S., Pellizari, V.H., New alk genes detected in Antarctic marine sediments (2009) Environ. Microbiol., 11 (3), pp. 669-673 Luqueño, F., Encinas, V.C., Marsch, R., Martínez-Suárez, C., Vázquez-Núñez, E., Dendooven, L., Microbial communities to mitigate contamination of PAHs in soil-possibilities and challenges: a review (2011) Environ. Sci. Pollut. Res., 18, pp. 12-30 Magot, M., Ollivier, B., Patel, B.K.C., Microbiology of petroleum reservoirs (2000) Antonie Leeuwenhoek, 77, p. 103 Malik, Z., Ahmed, S., Degradation of petroleum hydrocarbons by oil field isolated bacterial consortium (2012) Afr. J. Biotechnol., 11, p. n3 Mei, H., YIN, Y., Studies on marine oil spills and their ecological damage (2009) J. Ocean Univ., 8, pp. 312-316. , (China Oceanic and Coastal Sea Research) Mohammed, D., Ramsubhag, A., Beckles, D.M., An Assessment of the biodegradation of petroleum hydrocarbons in contaminated soil using non-indigenous, commercial microbes (2007) Water Air Soil Pollut, 182, pp. 349-356 Mrozik, A., Piotrowska-Seget, Z., Bioaugmentation as a strategy for cleaning up of soils contaminated with aromatic compounds (2010) Microbiol. Res., 165, pp. 363-375 Mulabagal, V., Yin, F., John, G.F., Hayworth, J.S., Clement, T.P., Chemical fingerprinting of petroleum biomarkers in Deepwater Horizon oil spill samples collected from Alabama shoreline (2013) Mar. Pollut. Bull., 70, pp. 147-154 Neveu, J., Regeard, C., DuBow, M.S., Isolation and characterization of two serine proteases from metagenomic libraries of the Gobi and Death Valley deserts (2011) Appl. Microbiol. Biotechnol., 91, pp. 635-644 Osterhage, C., Schwibbe, M., König, G.M., Wright, A.D., Differences between Marine and Terrestrial Phoma species as determined by HPLC-DAD and HPLC-MS (2000) Phytochem. Anal., 11, pp. 1-7 Pacheco, G.J., Ciapina, E.M.P., Gomes, E.B., Pereira Junior, N., Biosurfactant production by Rhodococcus Erythropolis and its application to oil removal (2010) Brazilian J. Microbiol., 41, pp. 685-693 Palme, O., Moszyk, A., Iphöfer, D., Lang, S., Selected Microbial Glycolipids: Production, Modification and Characterization (2010) Biosurfactants, Landes Bioscience and Springer Science Business Media, , Ramkrishna Sen. (Ed.), Cap 14 Peralta-Martínez, M.V., Palacios-Lozano, E.M., Blass-Amador, G., The effect of SARA fractions on viscosity for five mexican vacuum residues (2011) Energy Sources, Part A: Recovery, Utilization, Environ. Effects, 33 (10), pp. 920-924 Perelo, L.W., Review: in situ and bioremediation of organic pollutants in aquatic sediments (2010) J. Hazard. Mater., 177, pp. 81-89 Peters, K.E., Moldowan, J.M., (1993) The Biomarker Guide. Interpreting Molecular Fossils in Petroleum and Ancient Sediments, , Prentice-Hall+, Englewood Cliffs, NJ Peters, K.E., Walters, C.C., Moldowan, J.M., The Biomarker Guide. Biomarkers and Isotopes in Petroleum Systems and Earth History (2005), 1-2, p. 1155. , Cambridge University Press, USA, 2005Phale, P.S., Basu, A., Majhi, P.D., Deveryshetty, J., Vamsee-Krishna, C., Shrivastava, R., Metabolic diversity in bacterial degradation of aromatic compounds (2007) OMICS J. Integrative Biol., 11 (3) Quaiser, A., Zivanovic, Y., Moreira, D., Lopez-Garcia, P., Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara (2011) ISME J., 5, pp. 285-304 Ramsay, M.A., Swannell, R.P.J., Shipton, W.A., Duke, N., Hill, R.T., Effect of bioremediation on t e microbial community in oiled mangrove sediments (2000) Mar. Pollut. Bull., 41 (7-12), pp. 413-419 Ripp, S., Nivens, D.E., Ahn, Y., Werner, C., Jarrel, J., Easter, J.P., Cox, C.D., Sayler, G.S., Controlled field release of a bioluminescent genetically engineered microorganism for bioremediation process monitoring and control (2000) Environ. SciTechnol., 34, pp. 846-853 Sayler, G.S., Ripp, S., Field applications of genetically engineered microorganisms for bioremediation processes (2000) Curr. Opin. Biotechnol., 11 (3), pp. 286-289 Sayler, G.S., Cox, C.D., Burlage, R., Ripp, S., Nivens, D.E., Werner, C., Ahn, Y., Matrubutham, U., Field application of a genetically engineered microorganism for polycyclic aromatic hydrocarbon bioremediation process monitoring and control (1999) Novel Approach Biorem. Org. Pollut., pp. 241-254 Sierra-Garcia, I.N., Alvarez, J.C., Vasconcellos, S.P., Souza, A.P., Santos Neto, E.V., Oliveira, V.M., New hydrocarbon degradation pathways in the microbial metagenome from brazilian petroleum reservoirs (2014) Plos One, 9 (2) Silva, A.C., Fernando, J.S., de Oliveira, S., de Oliveira, F.J.S., Bernardes, D.S., França, F.P., Bioremediation of marine sediments impacted by petroleum (2009) Appl. Biochem. Biotechnol., 153, pp. 58-66 Silva, T.R., Verde, L.C.L., Santos Neto, E.V., Oliveira, V.M., Diversity analyses of microbial communities in petroleum samples from Brazilian oil fields (2013) Int. Biodeterior. Biodegrad., 81, pp. 57-70 Silva-Castro, G.A., Uad, I., Gonzalez-Lopez, J., Fandin, C.G., Toledo, F.L., Calvo, C., Application of selected microbial consortia combined with inorganic and oleophilic fertilizers to recuperate oil-polluted soil using land farming technology (2012) Clean Technol. Environ. Policy, 14, pp. 719-726 Tambekar, D.H., Gadakh, P.V., Isolation and characterization of biosurfactant-producing bacteria isolated from petroleum contaminated soil (2012) Int. J. Adv. Pharm. Biol. Sci., 2 (2), pp. 135-140 Tissot, P., Welte, D., (1984) Petroleum formation and occurrence, p. 699. , Springer Verlag, Berlin Tuleva, B., Christova, N., Cohen, R., Antonova, D., Todorov, T., Stoineva, I., Isolation and characterization of trehalose tetraester biosurfactants from a soil strain Micrococcus luteus BN56 (2009) Process. Biochem., 44, pp. 135-141 Tyagi, M., Fonseca, M.M.R., de Carvalho, C.C.C.R., Review Paper: Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes (2010) Biodegradation van Hamme, J.D., Singh, A., Ward, O.P., Recent advances in petroleum microbiology (2003) Microbiol. Mol. Biol. Rev., 67, p. 503 Vasconcellos, S.P., Crespim, E., Cruz, G.F., Senatore, D.B., Simioni, K.C.M., Santos Neto, E.V., Marsaioli, A.J., Oliveira, V.M., Isolation, biodegradation ability and molecular detection of hydrocarbon degrading bacteria in petroleum samples from a Brazilian offshore basin (2009) Org. Geochem., 40, pp. 574-588 Vasconcellos, S.P., Angolini, C.F.F., Garcia, I.N.S., Dellagnezze, B.M., Silva, C.C., Marsaioli, A.J., Neto, E.V.S., Oliveira, V.M., Screening for hydrocarbon biodegraders in a metagenomic clone library derived from Brazilian petroleum reservoirs (2010) Org. Geochem., 41, pp. 675-681 Vasconcellos, S.P., Dellagnezze, B.M., Wieland, A., Klock, J.H., Santos Neto, E.V., Marsaioli, A.J., Oliveira, V.M., Michaelis, W., The potential for hydrocarbon biodegradation and production of extracellular polymeric substances by aerobic bacteria isolated from a Brazilian petroleum reservoir (2011) World J. Microbiol. Biotechnol., 27 (6), pp. 1513-1518 Venosa, A.D., Suidan, M.T., King, D., Wrenn, B.A., Use of hopane as a conservative biomarker for monitoring the bioremediation effectiveness of crude oil contaminating a sandy beach (1997) J. Ind. Microbiol. Biotechnol., 18, pp. 131-139 Verde, L.C.L., Silva, T.R., Dellagnezze, B.M., Santos Neto, E.V., Oliveira, V.M., Diversity of hydrocarbon-related catabolic genes in oil samples from Potiguar Basin (RN, Brazil) (2013) J. Pet. Environ. Biotechnol., 4, p. 138 von der Weid, I., Marques, J.M., Cunha, C.D., Lippi, R.K., Santos, S.C.C., Rosado, A.S., Lins, U., Seldin, L., Identification and biodegradation potential of a novel strain of Dietzia cinnamea isolated from a petroleum-contaminated tropical soil (2007) Syst. Appl. Microbiol., 30 (4), pp. 331-339 Wang, Z., Fingas, M., Developments in the analysis of petroleum hydrocarbons in oils, petroleum products and oil-spill-related environmental samples by gas chromatography (1997) J. Chromatogr. A, 774, p. 51 Wang, Z., Yang, C., AL, E., Petroleum biomarker for oil spill characterization and source identification (2007) Oil Spill Environmental Forensics, , Academic Press, Oxford, Z. Wang, S. Stout (Eds.) Wang, X.B., Chi, C.Q., Nie, Y., Tang, Y.Q., Tan, Y., Wu, G., Wu, X.L., Degradation of petroleum hydrocarbons (C6-C40) and crude oil by a novel Dietzia strain (2011) Bioresour. Technol., 102, pp. 7755-7761 Wang, X.B., Nie, Y., Tang, Y.Q., Wu, G., Wu, X.L., N-Alkane Chain Length Alters Dietzia sp. Strain DQ12-45-1b Biosurfactant Production and Cell Surface Activity (2013) Appl. Environ. Microbiol., 79 (1), pp. 400-402 Wenger, L.M., Isaksen, G.H., Control of hydrocarbon seepage intensity on level of biodegradation in sea bottom sediments (2002) Org. Geochem., 33 (12), pp. 1277-1292 Winters, J.C., Williams, J.A., Microbial alteration of crude oil in the reservoir (1969), pp. E22-E31. , Symp. Petroleum Transformations in Geologic Environments. Am. Chem. Soc. Meet., New YorkZhu, X., Venosa, A.D., Suidan, M.T., Literature Review On The Use Of Commercial Bioremediation Agents For Cleanup Of Oil-Contaminated Estuarine Environments (2004), Epa/600/R-04/075