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Back to the future of soil metagenomics

Lagares, Antonio (2016)

Microbial Ecology of Arid Terrestrial Systems

Makhalanyane, Thulani P.; Cowan, Don; Ramond, Jean Baptiste

BarR, an Lrp-type transcription factor in sulfolobus acidocaldarius, regulates an aminotransferase gene in a Î²-alanine responsive manner.

Liu, Han [Vrije Universiteit Brussel. Research Group of Microbiology, Department of Bio-engineering Sciences]; Peeters, Eveline [Chile. Universidad Mayor. Centro de Genómica y Bioinformática]; Charlier, Daniel [Vrije Universiteit Brussel. Research Group of Microbiology, Department of Bio-engineering Sciences]; Albers, Sonja‐Verena [Max Planck Institute for Terrestrial Microbiology]; Bernander,Rolf [Stockholm University]; Ann‐Christin, Lindås [Stockholm University]; van Wolferen, Marleen [Max Planck Institute for Terrestrial Microbiology]; Maes, Dominique [Vrije Universiteit Brussel. Research Group of Microbiology, Department of Bio-engineering Sciences]; Orell, Alvaro [Max Planck Institute for Terrestrial Microbiology] (Facultad de Ciencias, 2014)

In archaea, nothing is known about the β-alanine degradation pathway or its regulation. In this work, we identify and characterize BarR, a novel Lrp-like transcription factor and the first one that has a non-proteinogenic ...

Amplicon-metagenomic analysis of fungi from antarctic terrestrial habitats

Baeza Cancino, Marcelo; Barahona, Salvador; Alcaíno Gorman, Jennifer; Cifuentes Guzmán, Víctor (Frontiers Media S.A., 2017)

© 2017 Baeza, Barahona, Alcaíno and Cifuentes. In cold environments such as polar regions, microorganisms play important ecological roles, and most of our knowledge about them comes from studies of cultivable microorganisms. ...

Amplicon metagenomic analysis of fungi from Antarctic Terrestrial habitats

Baeza Cancino, Marcelo; Barahona, Salvador; Alcaíno Gorman, Jennifer; Cifuentes Guzmán, Víctor (Frontiers Media, 2017)

In cold environments such as polar regions, microorganisms play important ecological roles, and most of our knowledge about them comes from studies of cultivable microorganisms. Metagenomic technologies are powerful tools ...

Draft genome sequence of Bacillus subtilis ALBA01, a strain with antagonistic activity against the soilborne fungal pathogen of onion Setophoma terrestris

Albarracín Orio, Andrea Georgina; Tobares, Romina Alín; Ducasse, Daniel Adrián; Smania, Andrea (American Society for Microbiology, 2016-06-02)

Bacillus subtilis is a nonpathogenic bacterium that lives in soil and has long been used as biological control agent in agriculture. Here, we report the genome sequence of a B. subtilis strain isolated from rhizosphere of ...

Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris

Universidade de São Paulo (USP); Universidade Estadual de Campinas (UNICAMP); Universidade de Sorocaba; Núcleo de Bionanomanufatura; Universidade Estadual Paulista (Unesp) (2020-10-01)

Abstract: Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts ...

Back to the Future of Soil Metagenomics

Nesme, Josephet; Achouak, W.; Agathos, S. N.; Bailey, M.; Baldrian, P.; Brunel, D.; Frostegård, Å.; Heulin, T.; Jansson, J. K.; Jurkevitch, E.; Kruus, K. L.; Kowalchuk, G. A.; Lagares, A.; Lappin-Scott, H. M.; Lemanceau, P.; Le Paslier, D.; Mandic-Mulec, I.; Murrell, J. C.; Myrold, D. D.; Nalin, R.; Nannipieri, P.; Neufeld, J. D.; O'Gara, F.; Parnell, J. J.; Pühler, A.; Pylro, Victor Satler; Ramos, J. L.; Roesch, Luiz Fernando Wurdig; Schloter, M.; Schleper, C.; Sczyrba, A.; Sessitsch, A.; Sjöling, S.; Sørensen, J.; Sørensen, S. J.; Tebbe, C. C.; Topp, E.; Tsiamis, G.; van Elsas, J. D.; van Keulen, G.; Widmer, F.; Wagner, M.; Zhang, T.; Zhang, X.; Zhao, L.; Zhu, Y. G.; Vogel, T. M.; Simonet, P. (Frontiers Research Foundation, 2016)

Terrestrial and marine Antarctic fungi extracts active against Xanthomonas citri subsp. citri

Universidade Estadual Paulista (Unesp) (2018-07-01)

This study aims to obtain secondary metabolites extracts from filamentous fungi isolated from soil and marine sediments from Antarctica and assess its potential antibacterial activity on Xanthomonas citri subsp. citri, the ...

Taxonomic Assessment And Enzymes Production By Yeasts Isolated From Marine And Terrestrial Antarctic Samples.

Duarte, A W F; Dayo-Owoyemi, I; Nobre, F S; Pagnocca, F C; Chaud, L C S; Pessoa, A; Felipe, M G A; Sette, L D (2013)

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