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Genome-wide scans for signatures of selection in Mangalarga Marchador horses using high-throughput SNP genotyping
(2021-12-01)
Background: The detection of signatures of selection in genomic regions provides insights into the evolutionary process, enabling discoveries regarding complex phenotypic traits. In this research, we focused on identifying ...
Ancient HTLV type 1 provirus DNA of andean mummy
(2000)
The worldwide geographic and ethnic clustering of patients with diseases related to human T cell lymphotropic virus type 1 (HTLV-1) may be explained by the natural history of HTLV-1 infection. The genetic characteristics ...
Association of chili pepper consumption, low socioeconomic status and longstanding gallstones with gallbladder cancer in a Chilean population
(2002)
We explored the risk factors for gallbladder cancer and explanations for its sharp and constant incidence increase in Chile since the 1970s. We compared 114 consecutive patients with verified gallbladder cancer, diagnosed ...
A novel SARS-CoV-2 viral sequence bioinformatic pipeline has found genetic evidence that the viral 3 ' untranslated region (UTR) is evolving and generating increased viral diversity
(Frontiers Media, 2021)
An unprecedented amount of SARS-CoV-2 sequencing has been performed, however,
novel bioinformatic tools to cope with and process these large datasets is needed.
Here, we have devised a bioinformatic pipeline that inputs ...
Genome-wide scan for selection signature and estimates of levels of autozygosity in Mangalarga Marchador horses
(Universidade Estadual Paulista (Unesp), 2020-02-28)
The Brazilian Mangalarga Marchador horse has dominated the attention of many horse breeders for their gaited phenotype over decades. A particularity of this breed is its intermediate-speed gait known as "marcha" in Brazil, ...
Influence of random point defects introduced by proton irradiation on critical current density and vortex dynamics of Ba(Fe0.925Co0.075)2As2 single crystals
(American Physical Society, 2012-01)
In this work we analyze the influence of random point defects introduced by 3 MeV proton irradiation on the critical current density (Jc) and vortex dynamics of a Ba(Fe0.925Co0.075)2As2 single crystal. The results show ...
Results of genetic and demographic analyses including probability of capturing the deepest coalescent event (Prob.), number of haplotypes (K), haplotype diversity (h), nucleotide diversity (π), Fu’s Fs (Fs), Tajima’s D (DT), Probability of DT ≠ 0 [Prob. (|DT|) > 0], probability of DT ≠ 0 based on coalescent simulations (P), Ramos-Onsins & Rozas’ (R2), probability of R2 based on coalescent simulations (P), maximum pairwise differences between any two sequences (k).Resultados de los análisis genéticos y demográficos, incluyendo la probabilidad de capturar el evento coalescente más profundo (Prob.), número de haplotipos (K), diversidad de haplotipos (h), diversidad de nucleótidos (π), Fs de Fu (Fs), D de Tajima (DT), Probabilidad de DT ≠ 0 [Prob. (|DT|) > 0], probabilidad de DT ≠ 0 basada en simulaciones coalescentes (P), Ramos-Onsins & Rozas' (R2), probabilidad de R2 basada en simulaciones coalescentes (P), diferencias máximas por pares entre dos secuencias cualesquiera (k).
(Plos One, 2015-06-25)
The sum of squared deviations (SSD) is also given.
Results of genetic and demographic analyses including probability of capturing the deepest coalescent event (Prob.), number of haplotypes (K), haplotype diversity (h), ...
Alcohol, tobacco and breast cancer - Collaborative reanalysis of individual data from 53 epidemiological studies, including 58 515 women with breast cancer and 95 067 women without the disease
(Nature Publishing Group, 2002)
Alcohol and tobacco consumption are closely correlated and published results on their association with breast cancer have not always allowed adequately for confounding between these exposures. Over 80% of the relevant ...