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On extending de Bruijn sequences
(Elsevier Science, 2011-09)
We give a complete proof of the following theorem: Every de Bruijn sequence of order n in at least three symbols can be extended to a de Bruijn sequence of order n+1. Every de Bruijn sequence of order n in two symbols can ...
Mathematical model and solution approaches for integrated lot-sizing, scheduling and cutting stock problems
(Springer, 2020-09-04)
In this paper, we address a two-stage integrated lot-sizing, scheduling and cutting stock problem with sequence-dependent setup times and setup costs. In production stage one, a cutting machine is used to cut large objects ...
Analysis of slipped sequences in EST projects
(Funpec-editoraRibeirao PretoBrasil, 2006)
Sequence independent lifting for mixed knapsack problems with GUB constraints
(Springer, 2015)
In this paper, we consider the semi-continuous knapsack problem with generalized
upper bound constraints on binary variables. We prove that generalized flow
cover inequalities are valid in this setting and, under mild ...
An architecture for solving sequencing and resource allocation problems using approximation methods
(STOCKTON PRESS, 1998)
In the search for better optimisation techniques, new methods that mix artificial intelligence and operations research have emerged. Search heuristics are integrated with optimisation algorithms. Approximation methods, ...
Feature extraction approaches for biological sequences: A comparative study of mathematical features
(2021-01-01)
As consequence of the various genomic sequencing projects, an increasing volume of biological sequence data is being produced. Although machine learning algorithms have been successfully applied to a large number of genomic ...
A Hybrid Genetic Algorithm using Progressive Alignment and Consistency based Approach for Multiple Sequence Alignments
(Scitepress, 2022-01-01)
The multiple sequence alignment is one of the most important tasks in bioinformatics, since it allows to analyze multiple sequences at the same time. There are many approaches for this problem such as heuristics and ...
Nonoverlapping Clone Pooling for High-Throughput Sequencing
(Ieee Computer Soc, 2013-09-01)
Simultaneously sequencing multiple clones using second-generation sequencers can speed up many essential clone-based sequencing methods. However, in applications such as fosmid clone sequencing and full-length cDNA sequencing, ...