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SKPDB: A structural database of shikimate pathway enzymes
(2010-01-07)
Background: The functional and structural characterisation of enzymes that belong to microbial metabolic pathways is very important for structure-based drug design. The main interest in studying shikimate pathway enzymes ...
SKPDB: A structural database of shikimate pathway enzymes
(2010-01-07)
Background: The functional and structural characterisation of enzymes that belong to microbial metabolic pathways is very important for structure-based drug design. The main interest in studying shikimate pathway enzymes ...
A FAST ALGORITHM ON AVERAGE FOR ALL-AGAINST-ALL SEQUENCE MATCHING
(IEEE TECHNICAL COMMITTEE ON DATA ENGINEERING, 1999)
We present an algorithm which attempts to align pairs of
subsequences from a database of genetic sequences. The algorithm
simulates the classical dynamic programming alignment algorithm over a
suffix array of the database. ...
Data mining of DNA sequences submitted by Peruvian institutions to public genetic databases
(Facultad de Ciencias Biológicas. Universidad Nacional Mayor de San Marcos, 2021)
Genetic diversity is an important component of biodiversity, and it is crucial for current efforts to protect and sustainably manage several organisms and habitats. As far as we know, there is only one work describing ...
Complex network study of the immune epitope database for parasitic organisms
(Bentham Science Publishers B.V., 2017)
The post-transcriptional gene silencing pathway in Eucalyptus
(2005-12-01)
Post-transcriptional gene silencing (PTGS) is a conserved surveillance mechanism that identifies and cleaves double-stranded RNA molecules and their cellular cognate transcripts. The RNA silencing response is actually used ...
The post-transcriptional gene silencing pathway in Eucalyptus
(2005-12-01)
Post-transcriptional gene silencing (PTGS) is a conserved surveillance mechanism that identifies and cleaves double-stranded RNA molecules and their cellular cognate transcripts. The RNA silencing response is actually used ...
Sequence-specific reconstruction from fragmentary databases using seed sequences: implementation and validation on SAGE, proteome and generic sequencing data
(OXFORD UNIV PRESS, 2008)
Motivation: DNA assembly programs classically perform an all-against-all comparison of reads to identify overlaps, followed by a multiple sequence alignment and generation of a consensus sequence. If the aim is to assemble ...
Molecular modeling databases: A new way in the search of protein targets for drug development
(2007-01-01)
DBMODELING is a relational database of annotated comparative protein structure models and their metabolic, pathway characterization. It is focused on enzymes identified in the genomes of Mycobacterium tuberculosis and ...