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Prediction ability for growth and maternal traits using SNP arrays based on different marker densities in Nellore cattle using the ssGBLUP
(2022-01-01)
This study aimed to investigate the prediction ability for growth and maternal traits using different low-density customized SNP arrays selected by informativeness and distribution of markers across the genome employing ...
Set de datos de SNP-array del alta densidad de caballos Pura Raza Española con anomalías cromosómicas numéricas del par sexual
Chromosomal abnormalities are a common cause of infertility in horses. However, they are difficult to detect using automated methods. Here, we propose a simple methodology based on single nucleotide polymorphism (SNP)-array ...
Application of a novel 50K SNP genotyping array to assess the genetic diversity and linkage disequilibrium in a farmed Pacific white shrimp (Litopenaeus vannamei) population
(Elsevier, 2021)
The inclusion of genomic information became a reality in shrimp breeding and it is expected to accelerate the
genetic gain over time. The decay of linkage disequilibrium (LD) between single nucleotide polymorphisms
(SNPs) ...
Application of a novel 50K SNP genotyping array to assess the genetic diversity and linkage disequilibrium in a farmed Pacific white shrimp (Litopenaeus vannamei) population
(2021-07-01)
The inclusion of genomic information became a reality in shrimp breeding and it is expected to accelerate the genetic gain over time. The decay of linkage disequilibrium (LD) between single nucleotide polymorphisms (SNPs) ...
Nuclear and plastid SNP markers for tracing Cedrela timber in the tropics
(2019-01-01)
Illegal logging and trade of timber are major worldwide concerns, resulting in biodiversity and economic losses. Tropical tree species in the genus Cedrela, which have historically been heavily exploited, are still often ...
Development of nuclear and plastid SNP markers for genetic studies of Dipteryx tree species in Amazonia
(Springer, 2019-09-01)
We developed nuclear and plastid single nucleotide polymorphism (SNP) and insertion/deletion (INDEL) markers for Dipteryx species using a combination of restriction associated DNA sequencing (RADSeq) and low coverage MiSeq ...
An updated Axiom buffalo genotyping array map and mapping of cattle quantitative trait loci to the new water buffalo reference genome assembly
(Wiley-Blackwell, 2021-06-09)
The objectives of this study were to provide the buffalo research community with an updated SNP map for the Axiom Buffalo Genotyping (ABG) array with genomic positions for SNP currently unmapped and to map all cattle QTL ...
Screening and detection of chromosomal copy number alterations in the domestic horse using SNP-array genotyping data
(Wiley Blackwell Publishing, Inc, 2021-08)
Chromosomal abnormalities are a common cause of infertility in horses. However, they are difficult to detect using automated methods. Here, we propose a simple methodology based on single nucleotide polymorphism (SNP)-array ...