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Estimates of autozygosity through runs of homozygosity in farmed coho salmon
(MDPI, 2020)
The characterization of runs of homozygosity (ROH), using high-density single nucleotide polymorphisms (SNPs) allows inferences to be made about the past demographic history of animal populations and the genomic ROH has ...
Study of functional variants in homozygous islands in Nelore cattle
(Oxford Univ Press Inc, 2019-12-01)
Runs of homozygosity: current knowledge and applications in livestock
(2017-06-01)
This review presents a broader approach to the implementation and study of runs of homozygosity (ROH) in animal populations, focusing on identifying and characterizing ROH and their practical implications. ROH are continuous ...
An updated Axiom buffalo genotyping array map and mapping of cattle quantitative trait loci to the new water buffalo reference genome assembly
(Wiley-Blackwell, 2021-06-09)
The objectives of this study were to provide the buffalo research community with an updated SNP map for the Axiom Buffalo Genotyping (ABG) array with genomic positions for SNP currently unmapped and to map all cattle QTL ...
Fine-scale estimation of inbreeding rates, runs of homozygosity and genome-wide heterozygosity levels in the Mangalarga Marchador horse breed
(2020-01-01)
With the availability of high-density SNP panels and the establishment of approaches for characterizing homozygosity and heterozygosity sites, it is possible to access fine-scale information regarding genomes, providing ...
Genome-wide scan for runs of homozygosity in the composite Montana Tropical® beef cattle
(2019-01-01)
The aim of this study was to assess the distribution of runs of homozygosity (ROH) and autozygosity islands in the composite Montana Tropical® beef cattle to explore hotspot regions which could better characterize the ...
Genome-wide identification of runs of homozygosity islands in the Gyr breed (Bos indicus)
(2020-03-01)
Runs of homozygosity (ROH) are contiguous homozygous regions of the genome. These regions can be used to identify genes associated with traits of economic interest, as well as inbreeding levels. The aim of the present study ...
Relationship of runs of homozygosity with adaptive and production traits in a paternal broiler line
(2018-06-01)
Genomic regions under high selective pressure present specific runs of homozygosity (ROH), which provide valuable information on the genetic mechanisms underlying the adaptation to environment imposed challenges. In broiler ...
Sperm morphometry is affected by increased inbreeding in the Retinta cattle breed: A molecular approach
(Wiley-liss, div John Wiley & Sons Inc., 2021-06)
The effect of inbreeding depression on sperm motility is well documented, but its influence on sperm morphometry has been scarcely examined to date. Here, we combined the use of computer‐assisted sperm morphometry analysis ...