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Simulation-based benchmarking of isoform quantification in single-cell RNA-seq
(2018)
Abstract
Single-cell RNA-seq has the potential to facilitate isoform quantification as the confounding factor of a mixed population of cells is eliminated. However, best practice for using existing quantification ...
RNA-SEQ: A GLANCE AT TECHNOLOGIES AND METHODOLOGIES
(Universidad Nacional de Colombia - Sede Bogotá - Faculdad de Ciencias - Departamento de Biología, 2015-05-01)
RNA Sequencing (RNA-Seq) is a newly born tool that has revolutionized the post-genomic era. The data produced by RNA-Seq, sequencing technologies and use of bioinformatics are exploding rapidly. In recent years, RNA-Seq ...
Differential Expression Analysis in RNA-seq Data Using a Geometric Approach
(Mary Ann Liebert, Inc, 2018-11-01)
Although differential gene expression (DGE) profiling in RNA-seq is used by many researchers, new packages and pipelines are continuously being presented as a result of an ongoing investigation. In this work, a geometric ...
Influência do número de repetições na identificação de genes diferencialmente expressos em experimentos de RNA-SeqInfluence of the number of repetitions in the identification of differentially expressed genes in RNA-Seq experiments
(Universidade Federal de ViçosaBREstatística Aplicada e BiometriaMestrado em Estatística Aplicada e BiometriaUFV, 2015)
Next generation sequencing yields the complete mitochondrial genome of the Endangered Chilean silverside Basilichthys microlepidotus (Jenyns, 1841) (Teleostei, Atherinopsidae), validated with RNA-seq
(Taylor & Francis, 2016)
The complete sequence of the mitochondrial genome for the Chilean silverside Basilichthys
microlepidotus is reported for the first time. The entire mitochondrial genome was 16,544 bp in
length (GenBank accession no. ...
Next generation sequencing yields the complete mitochondrial genome of the Endangered Chilean silverside Basilichthys icrolepidotus (Jenyns, 1841) (Teleostei, Atherinopsidae), validated with RNA-seq
(Taylor and Francis Ltd, 2016)
© 2014 Informa UK Ltd. The complete sequence of the mitochondrial genome for the Chilean silverside Basilichthys microlepidotus is reported for the first time. The entire mitochondrial genome was 16,544 bp in length (GenBank ...
RNA-Seq differential expression analysis: An extended review and a software tool
(2017-12-01)
The correct identification of differentially expressed genes (DEGs) between specific conditions is a key in the understanding phenotypic variation. High-throughput transcriptome sequencing (RNA-Seq) has become the main ...