Buscar
Mostrando ítems 1-10 de 1953
Prediction of Spontaneous Protein Deamidation from Sequence-Derived Secondary Structure and Intrinsic Disorder
(Public Library Of Science, 2015-12)
Asparagine residues in proteins undergo spontaneous deamidation, a post-translational modification that may act as a molecular clock for the regulation of protein function and turnover. Asparagine deamidation is modulated ...
Ab Initio Protein Structure Prediction Using Evolutionary Approach: A Survey
(Instituto de Informática - Universidade Federal do Rio Grande do Sul, 2021)
Ab initio protein folding simulations using atomic burials as informational intermediates between sequence and structure
(Wiley-Blackwell, 2014-07-01)
The three-dimensional structure of proteins is determined by their linear amino acid sequences but decipherment of the underlying protein folding code has remained elusive. Recent studies have suggested that burials, as ...
Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information
(2007-06-14)
Background: Structural properties of proteins such as secondary structure and solvent accessibility contribute to three-dimensional structure prediction, not only in the ab initio case but also when homology information ...
Protein Structure Prediction with Parallel Algorithms Orthogonal to Parallel Platforms
(Revista Eletrônica de Iniciação Científica em Computação, 2019)
Using genetic algorithm to design protein sequence
(Elsevier B.V., 2008-06-15)
In this work, genetic algorithms concepts along with a rotamer library for proteins side chains are used to optimize the tertiary structure of the hydrophobic core of Cytochrome b(562) starting from the known PDB structure ...
Approaches based on tree-structures classifiers to protein fold prediction
(Institute of Electrical and Electronics Engineers Inc., 2017-08)
Protein fold recognition is an important task in the biological area. Different machine learning methods such as multiclass classifiers, one-vs-all and ensemble nested dichotomies were applied to this task and, in most of ...
Computational analysis and functional prediction of ubiquitin hypothetical protein: A possible target in parkinson disease
(Bentham Science Publishers, 2016)
Predicting 13Ca chemical shifts for validation of protein structures
(Springer, 2007-07)
The 13Ca chemical shifts for 16,299 residues from 213 conformations of four proteins (experimentally determined by X-ray crystallography and Nuclear Magnetic Resonance methods) were computed by using a combination of ...