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alpha and beta Conformational preferences in fibril forming peptides characterised using NMR and CD techniques
(Ios PressAmsterdamHolanda, 2004)
Protein-protein interactions leave evolutionary footprints: High molecular coevolution at the core of interfaces
(John Wiley & Sons Inc, 2017-10)
Protein-protein interactions are essential to all aspects of life. Specific interactions result from evolutionary pressure at the interacting interfaces of partner proteins. However, evolutionary pressure is not homogeneous ...
Aromatic clusters in protein-protein and protein-drug complexes
(BioMed Central, 2020-05)
Aromatic rings are important residues for biological interactions and appear to a large extent as part of protein-drug and protein-protein interactions. They are relevant for both protein stability and molecular recognition ...
Technological and Protein Residue Analysis on Ancient Stemmed Projectile Points of the Southern Andes Highlands
(2024)
We present the results of technological and protein residue analyses of the lithic assemblagesrecovered at the Pedernales-38 site (26.5°S; 69°W), located in the highlands of the southernAndes (3380 masl). Based on a ...
Knots can impair protein degradation by ATP-dependent proteases
(National Academy of Sciences, 2017)
ATP-dependent proteases translocate proteins through a narrow pore for their controlled destruction. However, how a protein substrate containing a knotted topology affects this process remains unknown. Here, we characterized ...
Protein cutoff scanning: A comparative analysis of cutoff dependent and cutoff free methods for prospecting contacts in proteins
(Wiley-blackwellHobokenEUA, 2009)
TKSA-MC: A web server for rational mutation through the optimization of protein charge interactions
(2018-11-01)
The TKSAMC is a web server which calculates protein charge–charge interactions via the Tanford–Kirkwood Surface Accessibility model with the Monte Carlo method for sampling different protein protonation states. The ...
Network analysis of dynamically important residues in protein structures mediating ligand-binding conformational changes
(Springer, 2019-07)
According to the generalized conformational selection model, ligand binding involves the co-existence of at least two conformers with different ligand-affinities in a dynamical equilibrium. Conformational transitions between ...