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A Hybrid Approach using Progressive and Genetic Algorithms for Improvements in Multiple Sequence Alignments
(Scitepress, 2021-01-01)
The multiple sequence alignment is one of the main tasks in bioinformatics. It is used in different important biological analysis, such as function and structure prediction of unknown proteins. There are several approaches ...
A Hybrid Genetic Algorithm using Progressive Alignment and Consistency based Approach for Multiple Sequence Alignments
(Scitepress, 2022-01-01)
The multiple sequence alignment is one of the most important tasks in bioinformatics, since it allows to analyze multiple sequences at the same time. There are many approaches for this problem such as heuristics and ...
Using Threads to Overcome Synchronization Delays in Parallel Multiple Progressive Alignment Algorithms
(2012)
Problem statement: The parallelization of multiple progressive alignment algorithms is a difficult task. All known methods have strong bottlenecks resulting from synchronization delays. This is even more constraining in ...
Aligning teacher assessments and teacher learning through a teacher learning progression
(SPRINGER HEIDELBERG, 2022)
This theoretical piece discusses the concept of a teacher learning progression in an attempt to integrate teacher learning and assessment. From the authors' perspective, the main features of the teacher learning progression ...
An approach for COFFEE objective function to global DNA multiple sequence alignment
(Elsevier B.V., 2018-08-01)
Multiple sequence alignment (MSA) is one of the most important tasks in bioinformatics and it can be used to prediction of structures or functions of unknown proteins and to phylogenetic tree reconstruction. There are many ...
Melhoramento do resultado final do alinhamento múltiplo de sequências por meio de métodos de rearranjo de árvores e do princípio da evolução mínima
(Universidade Estadual Paulista (Unesp), 2019-08-07)
Os recentes avanços científicos e tecnológicos proporcionaram um grande aumento dos dados biológicos disponíveis para análise e técnicas manuais são inviáveis para executar a análise desses dados e, assim, a Bioinformática ...
Improvements in the score matrix calculation method using parallel score estimating algorithm
(2013)
The increasing amount of sequences stored in genomic databases has become unfeasible to the sequential analysis. Then, the parallel computing brought its power to the Bioinformatics through parallel algorithms to align and ...