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Protein misfolding and disease: The case of prion disorders
(2003)
Recent findings strongly support the hypothesis that diverse human disorders, including the most common neurodegenerative diseases, arise from misfolding and aggregation of an underlying protein. Despite the good evidence ...
Conformational changes, from β-strand to α-helix, of the fatty acid-binding protein ReP1-NCXSQ in anionic lipid membranes: dependence with the vesicle curvature
(Springer, 2017-07)
We studied the conformational changes of the fatty acid-binding protein ReP1-NCXSQ in the interface of anionic lipid membranes. ReP1-NCXSQ is an acidic protein that regulates the activity of the Na+/Ca2+ exchanger in squid ...
Alzheimer's and prion disease as disorders of protein conformation: Implications for the design of novel therapeutic approaches
(1999)
Several lines of evidence suggest that a defective protein folding is a central event in both Alzheimer's and prion disease. Although the two disorders are very different clinically, neuropathologically, and biochemically, ...
Network analysis of dynamically important residues in protein structures mediating ligand-binding conformational changes
(Springer, 2019-07)
According to the generalized conformational selection model, ligand binding involves the co-existence of at least two conformers with different ligand-affinities in a dynamical equilibrium. Conformational transitions between ...
CoDNaS: a database of conformational diversity in the native state of proteins
(Oxford University Press, 2013-10)
Motivation: Conformational diversity is a key concept in the understanding of different issues related with protein function such as the study of catalytic processes in enzymes, protein-protein recognition, protein evolution ...
Fatty acid and retinol-binding protein: Unusual protein conformational and cavity changes dictated by ligand fluctuations
(American Chemical Society, 2019-07-31)
Lipid-binding proteins (LBPs) are soluble proteins responsible for the uptake, transport, and storage of a large variety of hydrophobic lipophilic molecules including fatty acids, steroids, and other lipids in the cellular ...
Evolutionary Conserved Positions Define Protein Conformational Diversity
(Public Library of Science, 2016-03)
Conformational diversity of the native state plays a central role in modulating protein function. The selection paradigm sustains that different ligands shift the conformational equilibrium through their binding to ...
Conformational diversity and the emergence of sequence signatures during evolution
(Current Biology, 2015-03)
Proteins' native structure is an ensemble of conformers in equilibrium, including all their respective functional states and intermediates. The induced-fit first and the pre-equilibrium theories later, described how ...