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Predicting metabolic pathways of plant enzymes without using sequence similarity: Models from machine learning
(2020-01-01)
Most of the bioinformatics tools for enzyme annotation focus on enzymatic function assignments. Sequence similarity to well-characterized enzymes is often used for functional annotation and to assign metabolic pathways. ...
Elucidation of cladofulvin biosynthesis reveals a cytochrome P450 monooxygenase required for anthraquinone dimerization
(National Academy of Sciences, 2016)
Anthraquinones are a large family of secondary metabolites (SMs) that are extensively studied for their diverse biological activities. These activities are determined by functional group decorations and the formation of ...
Metabolic cost of osmoregulation in a hypertonic environment in the invasive African clawed frog Xenopus laevis
(Company of Biologists Ltd., 2016)
Studies of aquatic invertebrates reveal that salinity affects feeding and growth rates, reproduction, survival, and diversity. Little is known, however, about how salinity impacts the energy budget of vertebrates and ...
Enzyme Induction and Drug Metabolism
(Springer Nature Switzerland AG, 2021)
Enzyme induction is one of the most important underlying mechanism of drug-drug interactions (DDIs). It can be defined as an increase in the biosynthesis of metabolizing enzymes after the exposure of the organism to ...
Drug metabolizing enzymes in cerebrovascular endothelial cells afford a metabolic protection to the brain
(C.M.B.-Association, 1999)
The brain is partially protected from chemical insults by a physical barrier mainly formed by the cerebral microvasculature, which prevents penetration of hydrophilic molecules in the cerebral extracellular space. This ...
A metabolic pathway assembled by enzyme selection may support herbivory of leaf-cutter ants on plant starch
(2013-05-01)
Mutualistic associations shape the evolution in different organism groups. The association between the leaf-cutter ant Atta sexdens and the basidiomycete fungus Leucoagaricus gongylophorus has enabled them to degrade starch ...
Coping with salt water habitats: metabolic and oxidative responses to salt intake in the rufous-collared sparrow
(Frontiers media SA, 2017)
Many physiological adjustments occur in response to salt intake in several marine taxa, which manifest at different scales from changes in the concentration of individual molecules to physical traits of whole organisms. ...
Carbohydrate metabolization in late stages in the recalcitrant pollen of pumpkin (Cucurbita pepo L.)
(Wiley, 2015-05)
Pumpkin (Cucurbita pepo L.) pollen is starchy, sucrose-poor and recalcitrant, features opposite to those of several model species; therefore, some differences in carbohydrate metabolism could be expected in this species. ...
Dietary lipid-induced changes in enzymes of hepatic lipid metabolism
(Elsevier Science Inc, 2013-02)
Objective To investigate the effect of different dietary oils on the main hepatic enzymes involved in metabolism and their impact on oxidative stress status. Methods Twenty-four male Wistar rats were fed for 60 d on the ...