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Transcriptomic crosstalk between fungal invasive pathogens and their host cells: Opportunities and challenges for next-generation sequencing methods
(2016-03-01)
Fungal invasive infections are an increasing health problem. The intrinsic complexity of pathogenic fungi and the unmet clinical need for new and more effective treatments requires a detailed knowledge of the infection ...
SNP discovery in the marine gastropod Concholepas concholepas by high-throughput transcriptome sequencing
(2013)
Novel simple nucleotide polymorphisms (SNP) were identified using 454 transcriptome pyrosequencing in the snail Concholepas concholepas. From 2,991 contigs annotated with SNPs from De novo assembly, 7,069 putative polymorphisms ...
Identification of immune-related SNPs in the transcriptome of Mytilus chilensis through high-throughput sequencing
(2013)
Single nucleotide polymorphisms (SNPs) identified in coding regions represent a useful tool for understanding the immune response against pathogens and stressful environmental conditions. In this study, a SNPs database was ...
De novo assembly of Vriesea carinata leaf transcriptome to identify candidate cysteine-proteases
(Elsevier, 2019)
Vriesea carinata is an endemic bromeliad from the Brazilian Atlantic Forest. It has trichome and tank system in their leaves which allows to absorb water and nutrients. It belongs to Bromeliaceae family, which includes ...
Profiling the venom gland transcriptomes of Costa Rican snakes by 454 pyrosequencing
(BMC Genomics, 12:259, 2011, 2011)
Background: A long term research goal of venomics, of applied importance for improving current antivenom
therapy, but also for drug discovery, is to understand the pharmacological potential of venoms. Individually ...
Profiling the venom gland transcriptomes of Costa Rican snakes by 454 pyrosequencing
(BMC Genomics, 12:259, 2011, 2011)
Background: A long term research goal of venomics, of applied importance for improving current antivenom
therapy, but also for drug discovery, is to understand the pharmacological potential of venoms. Individually ...
Characterization of the small RNA content of Trypanosoma cruzi extracellular vesicles
(Elsevier Ltda, 2015)