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Evaluation of computational methods for the reconstruction of HLA haplotypes
(WILEY-BLACKWELL, 2010)
Human leukocyte antigen (HLA) haplotypes are frequently evaluated for population history inferences and association studies. However, the available typing techniques for the main HLA loci usually do not allow the determination ...
A beginner's guide for FMDV quasispecies analysis: sub-consensus variant detection and haplotype reconstruction using next-generation sequencing
(Oxford University Press, 2020-09)
Deep sequencing of viral genomes is a powerful tool to study RNA virus complexity. However, the analysis of next-generation sequencing data might be challenging for researchers who have never approached the study of viral ...
A beginner's guide for FMDV quasispecies analysis: Sub-consensus variant detection and haplotype reconstruction using next-generation sequencing
(Oxford University Press, 2020-09)
Deep sequencing of viral genomes is a powerful tool to study RNA virus complexity. However, the analysis of next-generation sequencing data might be challenging for researchers who have never approached the study of viral ...
Genomic association for sexual precocity in beef heifers using pre-selection of genes and haplotype reconstruction
(2018-01-01)
Reproductive traits are of the utmost importance for any livestock farming, but are difficult to measure and to interpret since they are influenced by various factors. The objective of this study was to detect associations ...
Genetic reconstruction of potential invasion pathways of Ligustrum lucidum into Argentina
(Gauthier-Villars/Editions Elsevier, 2021-08)
The study of the genetic characteristics of invasive plant species in native and invaded ranges is an increasingly important attempt for understanding current patterns of invasive plants distribution. While Argentina holds ...
Fire ants: What do rural and urban areas show us about occurrence, diversity, and ancestral state reconstruction?
(Soc Brasil Genetica, 2022-01-01)
In South America, Solenopsis saevissima and S. invicta are the most common fire ants. Nests are founded in areas under anthropic interference like urban or rural areas, but S. invicta is found preferentially in those with ...
Haplotype-based gene–gene interaction of bone morphogenetic protein 4 and interferon regulatory factor 6 in the etiology of non-syndromic cleft lip with or without cleft palate in a Chilean population
(Blackwell Munksgaard, 2017)
© 2017 Eur J Oral Sci Non-syndromic cleft lip with or without cleft palate (NSCL/P) is the most common craniofacial birth defect in humans, the etiology of which can be dependent on the interactions of multiple genes. We ...
Deletion 22q11.2: Report of a complex meiotic mechanism of origin
(Wiley-Blackwell, 2007-08-01)
We report on the case of a patient with a typical de novo 3 Mb 22q11.2 deletion. Haplotype reconstruction of the family, using polymorphic markets flanking the deleted region, demonstrated a complex mechanism of origin of ...
Association of haplotypes in the IL8 gene with susceptibility to chronic periodontitis in a Brazilian population
(ELSEVIER SCIENCE BV, 2010)
Background: Interleukin 8 (IL-8) is a chemokine related to the initiation and amplification of acute and chronic inflammatory processes. Polymorphisms in the IL8 gene have been associated with inflammatory diseases. We ...
Association of haplotypes in the IL8 gene with susceptibility to chronic periodontitis in a Brazilian population
(Elsevier B.V., 2010-09-06)
Background: Interleukin 8 (IL-8) is a chemokine related to the initiation and amplification of acute and chronic inflammatory processes. Polymorphisms in the IL8 gene have been associated with inflammatory diseases. We ...