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Mining Gene Regulatory Networks by Neural Modeling of Expression Time-Series
(IEEE Computer Society, 2015-11)
Discovering gene regulatory networks from data is one of the most studied topics in recent years. Neural networks can be successfully used to infer an underlying gene network by modeling expression profiles as times series. ...
Genes that code for T cell signaling proteins establish transcriptional regulatory networks during thymus ontogeny
(SPRINGER, 2008)
Gene expression profiling by cDNA microarrays during murine thymus ontogeny has contributed to dissecting the large-scale molecular genetics of T cell maturation. Gene profiling, although useful for characterizing the ...
Coarse-grain reconstruction of genetic networks from expression levels
(Elsevier Science, 2011-06)
In the postgenome era many efforts have been dedicated to systematically elucidate the complex web of interacting genes and proteins. These efforts include experimental and computational methods. Microarray technology ...
In silico network topology-based prediction of gene essentiality
(Elsevier B.V., 2008-02-01)
The identification of genes essential for survival is important for the understanding of the minimal requirements for cellular life and for drug design. As experimental studies with the purpose of building a catalog of ...
In silico network topology-based prediction of gene essentiality
(Elsevier B.V., 2008-02-01)
The identification of genes essential for survival is important for the understanding of the minimal requirements for cellular life and for drug design. As experimental studies with the purpose of building a catalog of ...
Gene Expression Complex Networks: Synthesis, Identification, and Analysis
(MARY ANN LIEBERT INC, 2011)
Thanks to recent advances in molecular biology, allied to an ever increasing amount of experimental data, the functional state of thousands of genes can now be extracted simultaneously by using methods such as cDNA microarrays ...
Reconstruction of a gene regulatory network of the induced systemic resistance defense response in Arabidopsis using boolean networks.
Background: An important process for plant survival is the immune system. The induced systemic resistance (ISR) triggered by beneficial microbes is an important cost-effective defense mechanism by which plants are primed ...