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Identification of Modules With Similar Gene Regulation and Metabolic Functions Based on Co-expression Data
(FRONTIERS MEDIA SA, 2019)
Biological systems respond to environmental perturbations and to a large diversity of compounds through gene interactions, and these genetic factors comprise complex networks. In particular, a wide variety of gene co-expression ...
Co-expression and transcriptome analysis of marchantia polymorpha transcription factors supports class c arfs as independent actors of an ancient auxin regulatory module
(Frontiers Media S.A., 2018-10)
We performed differential gene expression (DGE) and co-expression analyses with genes encoding components of hormonal signaling pathways and the ∼400 annotated transcription factors (TFs) of M. polymorpha across multiple ...
The tgf-beta co-receptor endoglin modulates the expression and transforming potential of h-ras
(OXFORD UNIV PRESS, 2010)
CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses
(BioMed Central, 2018)
Abstract
Background
The analysis of modular gene co-expression networks is a well-established method commonly used for discovering the systems-level functionality of genes. ...
CEMiTool: a Bioconductor package for performing comprehensive modular co expression analyses
(BIOMED Central, 2018)
Background: The analysis of modular gene co-expression networks is a well-established method commonly used for discovering the systems-level functionality of genes. In addition, these studies provide a basis for the discovery ...
CEMiTool: A Bioconductor package for performing comprehensive modular co-expression analyses
(BioMed Central Ltd., 2018)
Background: The analysis of modular gene co-expression networks is a well-established method commonly used
for discovering the systems-level functionality of genes. In addition, these studies provide a basis for the ...
beta-ionone modulates the expression of miRNAs and genes involved in the metastatic phenotype of microdissected persistent preneoplastic lesions in rats submitted to hepatocarcinogenesis
(Wiley-Blackwell, 2017-01-01)
MicroRNAs (miRNAs) are post-transcriptional gene expression regulators which expression is frequently altered in hepatocellular carcinoma (HCC). -ionone (I) is noted for its ability to inhibit persistent preneoplastic ...
b-Ionone Modulates the Expression of miRNAs and Genes Involved in the Metastatic Phenotype of Microdissected Persistent Preneoplastic Lesions in Rats Submitted to Hepatocarcinogenesis
(2016)
MicroRNAs (miRNAs) are post-transcriptional gene expression regulators which expression is frequently altered in
hepatocellular carcinoma (HCC). b-ionone (bI) is noted for its ability to inhibit persistent preneoplastic ...
WebCEMiTool: Co-expression modular analysis made easy
(Frontiers Media S.A., 2019)
Co-expression analysis has been widely used to elucidate the functional architecture of genes under different biological processes. Such analysis, however, requires substantial knowledge about programming languages and/or ...
Downregulation of L-arginine metabolism in dendritic cells induces tolerance to exogenous antigen
(2017-03-01)
Dendritic cells (DC) are potential tools for therapeutic applications and several strategies to generate tolerogenic DCs are under investigation. When activated by cytokines and microbial products, DCs express mediators ...