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16S rRNA gene amplicon dataset of prokaryotic communities from a subantarctic marine ecosystem: Ushuaia Bay and surrounding waters
(Elsevier Inc, 2020-10)
We provide a 16S rRNA gene dataset of prokaryotic assemblages of a subantarctic marine ecosystem. Samples were collected at 2 stations (one near Ushuaia Bay and the other close to Bridges islands in the Beagle Channel). ...
The Bias Associated with Amplicon Sequencing Does Not Affect the Quantitative Assessment of Bacterial Community Dynamics
(Public Library of Science, 2014-06)
The performance of two sets of primers targeting variable regions of the 16S rRNA gene V1-V3 and V4 was compared in their ability to describe changes of bacterial diversity and temporal turnover in full-scale activated ...
Bacterial Diversity Profiling around the Orca Seamount in the Bransfield Strait, Antarctica, Based on 16S rRNA Gene Amplicon Sequences
(American Society for MicrobiologyUS, 2021-01)
Hydrothermal vent activity is often associated with submarine volcanism. Here, we investigated the presence of microorganisms related to hydrothermal activity in the Orca seamount. Data profiling of the 16S rRNA gene ...
Microbial Diversity of the Red Sea Urchin Loxechinus albus during Controlled Farming in Puerto Montt, Chile, Using 16S rRNA Gene Amplicon Sequencing
(Facultad de Medicina Veterinaria, 2019)
Loxechinus albus is a shallow-water sea urchin, and its distribution is related to the cold water of the Southern Hemisphere. Recently, bacterial communities, also called microbiota, in sea urchins have started being ...
Microbial diversity of the Red Sea Urchin Loxechinus albus during controlled farming in Puerto Montt, Chile, using 16S rRNA gene amplicon sequencing
(2019-10-17)
Loxechinus albus is a shallow-water sea urchin, and its distribution is related to the cold water of the Southern Hemisphere. Recently, bacterial communities, also called microbiota, in sea urchins have started being ...
Fecal Microbiome Characteristics and the Resistome Associated With Acquisition of Multidrug-Resistant Organisms Among Elderly Subjects
(Frontiers Media S.A., 2019-09)
Infections caused by multidrug-resistant organisms (MDRO) lead to considerable morbidity and mortality. The elderly population residing in nursing homes are a major reservoir of MDRO. Our objective was to characterize the ...
Multiplex Amplicon Sequencing For Microbe Identification In Community-based Culture Collections
(Nature Publishing Group, 2016)
Microbial community analysis of soils under different soybean cropping regimes in the Argentinean south-eastern Humid Pampas
(Wiley Blackwell Publishing, Inc, 2021-01)
Soil microbial communities are key players of ecosystem processes and important for crop and soil health. The Humid Pampas region in Argentina concentrates 75% of the national soybean production, which is based on intensive ...
Two amplicon sequencing strategies revealed different facets of the prokaryotic community associated with the anaerobic treatment of vinasses from ethanol distilleries
(Elsevier, 2014-02)
The prokaryotic consortium from a pilot-scale UASB reactor fed with vinasses from ethanol distilleries was evaluated by means of amplicon sequencing of the 16S rRNA gene. Two different sets of primers targeted to overlapping ...