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RNA-Seq analysis and transcriptome assembly of raspberry fruit (Rubus idaeus ¨Heritage¨) revealed several candidate genes involved in fruit development and ripening
(Elsevier B.V., 2019)
Using Illumina HiSeq ™ 2000 sequencing platform (100 bp double-end reads), we performed transcriptome analysis of flower (F), green (G) and pink (P) fruit stages of red raspberry. Transcriptome was obtained by the de-novo ...
Comparative transcriptome analysis of early somatic embryo formation and seed development in Brazilian pine, Araucaria angustifolia (Bertol.) Kuntze
(SpringerDordrecht, 2014-06-11)
Somatic embryogenesis (SE) is a method for producing embryos in vitro and is considered a highly promising approach for micropropagation and germplasm conservation. However, the application of SE for genetic breeding and ...
A reference floral transcriptome of sexual and apomictic Paspalum notatum
(BioMed Central, 2017-04)
Background: Paspalum notatum Flügge is a subtropical grass native to South America, which includes sexual diploid and apomictic polyploid biotypes. In the past decade, a number of apomixis-associated genes were discovered ...
Transcriptome Analysis of the Triatoma infestans (Hemiptera: Reduviidae) Integument
(Entomological Society of America, 2017-09)
The insect integument, formed by the cuticle and the underlying epidermis, is essential for insect fitness, regulation of lipid biosynthesis and storage, insect growth and feeding, together with development progress. Its ...
The first transcriptomes from field-collected individual whiteflies (Bemisia tabaci, hemiptera: Aleyrodidae): A case study of the endosymbiont composition
(2017-01-01)
Background: Bemisia tabaci species (B. tabaci), or whiteflies, are the world’s most devastating insect pests. They cause billions of dollars (US) of damage each year, and are leaving farmers in the developing world food ...
The mitochondrial genomes of Atlas Geckos (Quedenfeldtia): mitogenome assembly from transcriptomes and anchored hybrid enrichment datasets
(Taylor & Francis Ltd, 2017-01-01)
The nearly complete mitogenomes of the two species of North African Atlas geckos, Quedenfeldtia moerens and Q. trachyblepharus were assembled from anchored hybrid enrichment data and RNAseq data. Congruent assemblies were ...
Endosperm-preferred expression of maize genes as revealed by transcriptome-wide analysis of expressed sequence tags
(SpringerDordrechtHolanda, 2005)
Revealing the Venomous Secrets of the Spider's Web
(2020-08-07)
Orb-weaving spiders use a highly strong, sticky and elastic web to catch their prey. These web properties alone would be enough for the entrapment of prey; however, these spiders may be hiding venomous secrets in the web, ...
Transcriptome Profiling of Pacu (Piaractus mesopotamicus) Challenged With Pathogenic Aeromonas hydrophila: Inference on Immune Gene Response
(2020-06-09)
Pacu (Piaractus mesopotamicus) is a Neotropical fish of major importance for South American aquaculture. Septicemia caused by Aeromonas hydrophila bacteria is currently considered a substantial threat for pacu aquaculture ...
Allele identification for transcriptome-based population genomics in the invasive plant Centaurea solstitialis
(Genetics Soc Am, 2013-02)
Transcriptome sequences are becoming more broadly available for multiple individuals of the same species, providing opportunities to derive population genomic information from these datasets. Using the 454 Life Science ...