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Sequencing and de novo assembly of the red cusk-eel (Genypterus chilensis) transcriptome
(2014)
The red cusk-eel (Genypterus chilensis) is an endemic fish species distributed along the coasts of the Eastern South Pacific. Biological studies on this fish are scarce, and genomic information for G. chilensis is practically ...
The Rhinella arenarum transcriptome: de novo assembly, annotation and gene prediction
(Nature Research, 2020-12)
The common toad Rhinella arenarum is widely distributed in Argentina, where it is utilised as an autochthonous model in ecotoxicological research and environmental toxicology. However, the lack of a reference genome makes ...
De novo transcriptome sequencing and assembly from apomictic and sexual Eragrostis curvula genotypes
(Public Library of Science, 2017-11-01)
A long-standing goal in plant breeding has been the ability to confer apomixis to agriculturally relevant species, which would require a deeper comprehension of the molecular basis of apomictic regulatory mechanisms. ...
Unraveling the complex genome of Saccharum spontaneum using Polyploid Gene Assembler
(DNA Research, 2019)
De novo transcriptome assembly: a new laccase multigene family from the marine-derived basidiomycete Peniophora sp. CBMAI 1063
(2017-12-01)
Laccases are multicopper oxidases that are able to catalyze reactions involving a range of substrates, including phenols and amines, and this ability is related to the existence of different laccases. Basidiomycetes usually ...
Dataset for the proteomic and transcriptomic analyses of perivitelline fluid proteins in Pomacea snail eggs
(Elsevier Inc, 2017-12)
This article describes how the proteomic and transcriptomic data were produced during a study of the reproductive proteins of Pomacea maculata, an aquatic apple snail laying colorful aerial eggs, and provides public access ...
Characterization of a second secologanin synthase isoform producing both secologanin and secoxyloganin allows enhanced de novo assembly of a Catharanthus roseus transcriptome
(BMCBiotecnologíaLondres, Inglaterra, 2021)
De novo assembly and functional annotation of blood transcriptome of loggerhead turtle, and in silico characterization of peroxiredoxins and thioredoxins
The aim of this study was to generate and analyze the atlas of the loggerhead turtle blood transcriptome by RNA-seq, as well as identify and characterize thioredoxin (Tnxs) and peroxiredoxin (Prdxs) antioxidant enzymes of ...