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Hla-mapper: An application to optimize the mapping of HLA sequences produced by massively parallel sequencing procedures
(2018-09-01)
A challenging task when more than one HLA gene is evaluated together by second-generation sequencing is to achieve a reliable read mapping. The polymorphic and repetitive nature of HLA genes might bias the read mapping ...
Pyrearinus termitilluminans larval click beetle luciferase: Active site properties, structure and function relationships and comparison with other beetle luciferases
(2009-12-01)
Several beetle luciferases have been cloned and sequenced. However, most studies on structure and function relationships and bioanalytical applications were done with firefly luciferases, which are pH sensitive. Several ...
Pyrearinus termitilluminans larval click beetle luciferase: Active site properties, structure and function relationships and comparison with other beetle luciferases
(2009-12-01)
Several beetle luciferases have been cloned and sequenced. However, most studies on structure and function relationships and bioanalytical applications were done with firefly luciferases, which are pH sensitive. Several ...
Report of a chimeric origin of transposable elements in a bovine-coding gene
(2008-04-22)
Despite the wide distribution of transposable elements (TEs) in mammalian genomes, part of their evolutionary significance remains to be discovered. Today there is a substantial amount of evidence showing that TEs are ...
Report of a chimeric origin of transposable elements in a bovine-coding gene
(2008-04-22)
Despite the wide distribution of transposable elements (TEs) in mammalian genomes, part of their evolutionary significance remains to be discovered. Today there is a substantial amount of evidence showing that TEs are ...
Orthologous comparison in a gene-rich region among grasses reveals stability in the sugarcane polyploid genome
(Blackwell PublishingOxfordInglaterra, 2007)
Comparison of Lagostomus maximus amelogenin gene (AMELX) with other mammals
(Academic Journals Inc, 2016-08)
The aim of this study was to compare the Lagostomus maximus AMEL sequence to assess their similarity with the AMEL genes from other mammals. Previously we reported a sequence of the AMEL gene of Lagostomus maximus which ...
Sequence-specific reconstruction from fragmentary databases using seed sequences: implementation and validation on SAGE, proteome and generic sequencing data
(OXFORD UNIV PRESS, 2008)
Motivation: DNA assembly programs classically perform an all-against-all comparison of reads to identify overlaps, followed by a multiple sequence alignment and generation of a consensus sequence. If the aim is to assemble ...
Araçatuba virus: A vaccinialike virus associated with infection in humans and cattle
(2003-02-01)
We describe a vaccinialike virus, Araçatuba virus, associated with a cowpoxlike outbreak in a dairy herd and a related case of human infection. Diagnosis was based on virus growth characteristics, electron microscopy, and ...