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Genome assembly of the cichlid fish Astatotilapia latifasciata with focus in population genomics of B chromosome polymorphism
(Universidade Estadual Paulista (Unesp), 2017-08-11)
B chromosomes (Bs) are additional to the standard regular chromosome set (As), and present in all groups of eukaryotes. A reference genome is key to understand genomics aspects of an organism. Here, we present the de novo ...
Genome sequence and analysis of the tuber crop potato
(Springer Nature, 2011)
Potato (Solanum tuberosum L.) is the world's most important non-grain food crop and is central to global food security. It is clonally propagated, highly heterozygous, autotetraploid, and suffers acute inbreeding depression. ...
Integration and visualization of systems biology data in context of the genome
(BIOMED CENTRAL LTD, 2010)
Background: High-density tiling arrays and new sequencing technologies are generating rapidly increasing volumes of transcriptome and protein-DNA interaction data. Visualization and exploration of this data is critical to ...
BGGE: a new package for genomic-enabled prediction incorporating genotype × environment interaction models
(Genetics Society of America, 2018)
Complete mitochondrial genomes of six species of the freshwater red algal order Batrachospermales (Rhodophyta)
(Taylor & Francis Ltd, 2018-01-01)
Only two mitochondrial (mt) genomes had been reported in members of the red algal order Batrachospermales, which are confined to freshwater habitats. Additional mt genomes of six representative members (Batrachospermum ...
The 4.(n) wheat breeding era: genomic-based predictions becoming part of the daily routine and beyond
(Brazilian Society of Biotechnology, 2022)
An open dataset of Plasmodium vivax genome variation in 1,895 worldwide samples
(F1000 Research, 2022)
This report describes the MalariaGEN Pv4 dataset, a new release of curated genome variation data on 1,895 samples of Plasmodium vivax collected at 88 worldwide locations between 2001 and 2017. It includes 1,370 new samples ...
lme4GS: an R-Package for Genomic Selection
(Frontiers, 2021)
An open dataset of Plasmodium falciparum genome variation in 7,000 worldwide samples
(F1000 Research, 2021)
MalariaGEN is a data-sharing network that enables groups around the world to work together on the genomic epidemiology of malaria. Here we describe a new release of curated genome variation data on 7,000 Plasmodium falciparum ...
Species relationships among the wild B genome of Arachis species (section Arachis) based on FISH mapping of rDNA loci and heterochromatin detection: a new proposal for genome arrangement
(Springer, 2010-05)
Arachis hypogaea is an allotetraploid species with low genetic variability. Its closest relatives, all of the genus Arachis, are important sources of alleles for peanut breeding. However, a better understanding of the ...