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Reconstruction of a gene regulatory network of the induced systemic resistance defense response in Arabidopsis using boolean networks.
Background: An important process for plant survival is the immune system. The induced systemic resistance (ISR) triggered by beneficial microbes is an important cost-effective defense mechanism by which plants are primed ...
Filtering of data-driven gene regulatory networks using drosophila melanogaster as a case study
(Frontiers Media, 2021)
Gene Regulatory Networks (GRNs) allow the study of regulation of gene expression of whole genomes. Among the most relevant advantages of using networks to depict this key process, there is the visual representation of large ...
A software tool for discovery of gene regulatory networks: Analysis of Alzheimer disease data
(Sociedad Argentina de Informática e Investigación Operativa, 2018)
A gene regulatory network (GRN) is a collection of molecular regulatorsthat interact with each other to govern the majority of the molecular processes.These networks play a central role in in every process of life, therefore, ...
Modularity and evolutionary constraints in a baculovirus gene regulatory network
(BioMed Central, 2013)
Abstract
Background
The structure of regulatory networks remains an open question in our understanding of complex biological systems. Interactions during complete viral life cycles present ...
Enterococcus faecalis reconfigures its gene regulatory network activation under copper exposure
(2014)
A gene regulatory network was generated in the bacterium Enterococcus faecalis in order to understand how this organism can activate its expression under different copper concentrations. The topological evaluation of the ...
Extreme learning machines for reverse engineering of gene regulatory networks from expression time series
(Oxford University Press, 2017-11)
The reconstruction of gene regulatory networks (GRNs) from genes profiles has a growing interest in bioinformatics for understanding the complex regulatory mechanisms in cellular systems. GRNs explicitly represent the ...