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RDAVIDWebService: a versatile R interface to DAVID
(Oxford University Press, 2013-08)
The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on ...
Aplicando princípios de aprendizado de máquina na construção de um biocurador automático para o Gene Ontology (GO)
(Universidade Federal de São CarlosBRUFSCarPrograma de Pós-Graduação em Ciência da Computação - PPGCC, 2013-10-08)
Nowadays, the amount of biological data available by universities, hospitals and research centers has increased exponentially due the use of bioinformatics, with the development of methods and advanced computational tools, ...
Comparative eye and liver differentially expressed genes reveal monochromatic vision and cancer resistance in the shortfin mako shark (Isurus oxyrinchus)
(2020-11-01)
The shortfin mako, Isurus oxyrinchus is an oceanic pelagic shark found worldwide in tropical and subtropical waters. However, the understanding of its biology at molecular level is still incipient. We sequenced the messenger ...
Hierarchical classification of gene ontology-based protein functions with neural networks
(International Neural Network Society – INNSIEEE Computational Intelligence SocietyKillarney, 2015-07)
Hierarchical Multi-label Classification (HMC) is a classification task where classes are organized in a hierarchical taxonomy, and instances can be simultaneously classified in more than one class. This paper investigates ...
Inferring Unknown Biological Function by Integration of GO Annotations and Gene Expression Data
(IEEE Computer Society, 2018-01)
Characterizing genes with semantic information is an important process regarding the description of gene products. In spite that complete genomes of many organisms have been already sequenced, the biological functions of ...
Engenharia ontológica aplicada para o projeto e especificação da ontocancro
(Universidade Federal de Santa MariaBrasilCiência da ComputaçãoUFSMPrograma de Pós-Graduação em Ciência da ComputaçãoCentro de Tecnologia, 2019-08-16)
The analysis of information generated by studies in the field of bioinformatics and molecular
biology helps researchers to understand complex cellular processes and genetic interactions
in the stages of pathologies that ...
Herramienta para Filtrado Estructural sobre Ontología Gene Ontology
(Facultad de Ciencias Exactas, Ingeniería y Agrimensura. Universidad Nacional de Rosario, 2014)
The plant ontology as a tool for comparative plant anatomy and genomic analyses
(Oxford University PressJapanese Society of Plant Physiologistshttp://pcp.oxfordjournals.org/content/54/2/e1.abstract, 2013)
BayGO: Bayesian analysis of ontology term enrichment in microarray data
(2006-02)
Abstract
Background
The search for enriched (aka over-represented or enhanced) ontology terms in a list of genes obtained ...
Implementación de clasificadores jerárquicos multiclase para la predicción de función de genes a partir de su ubicación en el genoma
(Udelar.FI., 2022)
El reciente desarrollo tecnológico está generando datos genómicos mucho más rápido que nuestra capacidad de analizarlos. Es imprescindible, en este contexto, implementar herramientas que permitan reducir el tiempo y el ...