Characterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper

dc.creatorArbizu Berrocal, Carlos Irvin
dc.creatorSaldaña Serrano, Carla Lizet
dc.creatorFerro Mauricio, Rubén Darío
dc.creatorChávez Galarza, Julio César
dc.creatorHerrera, Jordán
dc.creatorContreras Liza, Sergio
dc.creatorGuerrero Abad, Juan Carlos
dc.creatorMaicelo Quintana, Jorge Luis
dc.date.accessioned2022-03-02T23:27:42Z
dc.date.accessioned2023-05-24T15:00:37Z
dc.date.available2022-03-02T23:27:42Z
dc.date.available2023-05-24T15:00:37Z
dc.date.created2022-03-02T23:27:42Z
dc.date.issued2022-01-05
dc.identifierCarlos I. Arbizu, Carla L. Saldaña, Rubén D. Ferro-Mauricio, Julio C. Chávez- Galarza, Jordan Herrera, Sergio Contreras-Liza, Juan C. Guerrero-Abad & Jorge L. Maicelo (2022) Characterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper, Mitochondrial DNA Part B, 7:1, 156-158, doi: 10.1080/23802359.2021.2014366
dc.identifierhttps://hdl.handle.net/20.500.12955/1631
dc.identifierMitochondrial DNA Part B
dc.identifierhttps://doi.org/10.1080/23802359.2021.2014366
dc.identifier.urihttps://repositorioslatinoamericanos.uchile.cl/handle/2250/6440269
dc.description.abstractIn this study, we sequenced the first complete chloroplast (cp) genome of a Peruvian chili pepper landrace, “arnacucho” (Capsicum chinense). This cp genome has a 156,931 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (87,325 bp) and a 17,912 bp small single-copy (SSC) region, separated by two inverted repeat (IR) regions (25,847 bp); and the percentage of GC content was 37.71%. Arnaucho chili pepper chloroplast genome possesses 133 genes that consists of 86 protein-coding genes, 37 tRNA, eight rRNA, and two pseudogenes. Phylogenetic analysis revealed that this Peruvian chili pepper landrace is closely related to the undomesticated species C. galapagoense; all belong to the Capsiceae tribe.
dc.languageeng
dc.publisherTaylor & Francis Group
dc.publisherReino Unido
dc.relationMitochondrial DNA Part B, 7:1, 156-158
dc.relationhttps://doi.org/10.1080/23802359.2021.2014366
dc.rightshttps://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rightsinfo:eu-repo/semantics/openAccess
dc.sourceInstituto Nacional de Innovación Agraria
dc.sourceRepositorio Institucional - INIA
dc.subjectNGS
dc.subjectChloroplast
dc.subjectGenetic resources
dc.subjectArnaucho
dc.subjectPhylogenomics
dc.titleCharacterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper
dc.typeinfo:eu-repo/semantics/article


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