info:eu-repo/semantics/article
Covidex: an ultrafast and accurate tool for virus subtyping
Fecha
2020-08-21Registro en:
Cacciabue, Marco Polo Domingo; Aguilera, Pablo Nicolas; Gismondi, Maria Ines; Taboga, Oscar Alberto; Covidex: an ultrafast and accurate tool for virus subtyping; Cold Spring Harbor Laboratory Press; bioRxiv; 2020; 21-8-2020; 1-5
2692-8205
CONICET Digital
CONICET
Autor
Cacciabue, Marco Polo Domingo
Aguilera, Pablo Nicolas
Gismondi, Maria Ines
Taboga, Oscar Alberto
Resumen
Covidex is an open-source, alignment-free machine learning subtyping tool for viral species. It is a shiny app that allows a fast and accurate classification in pre-defined clusters for SARS-CoV-2 and FMDV genome sequences. The user can also build its own classification models with the Covidex model generator.