Artículos de revistas
Live Phylogeny
Registration in:
Journal Of Computational Biology. Mary Ann Liebert Inc, v. 20, n. 1, n. 30, n. 37, 2013.
1066-5277
WOS:000313358400003
10.1089/cmb.2012.0219
Author
Telles, GP
Almeida, NF
Minghim, R
Walter, MEMT
Institutions
Abstract
Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) The live phylogeny problem generalizes the phylogeny problem while admitting the existence of living ancestors among the taxonomic objects. This problem suits the case of fast-evolving species, like virus, and the construction of phylogenies for nonbiological objects like documents, images, and database records. In this article, we formalize the live phylogeny problem for distances and character states and introduce polynomial-time algorithms for particular versions of the problems. We believe that more general versions of the problems are NP-hard and that many heuristic and approximation approaches may be developed as solution strategies. 20 1 30 37 Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) FINEP [01.08.0166.00] Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) CNPq [305503/2010-3, 306731/2009-6] FINEP [01.08.0166.00]