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BZIP transcription factors and transcriptional regulatory networks in the neurospora circadian system
(2014)
Circadian clocks are endogenous cellular timekeepers that confer daily rhythms to a large number of biological processes. These clocks are present in various organisms across different evolutionary lineages, in which they ...
Competing endogenous RNA networks in the epithelial to mesenchymal transition in diffuse-type of gastric cancer
(MDPI, 2020)
The diffuse-type of gastric cancer is associated with epithelial to mesenchymal transition. Loss of E-cadherin expression is the hallmark of this process and is largely due to the upregulation of the transcription factors ...
Chronic copper treatment prevents the liver critical balance transcription response induced by acetaminophen
(Elsevier GmbH, 2019)
The independent toxic effects of copper and acetaminophen are among the most studied topics in liver toxicity. Here, in an animal model of Cebus capucinus chronically exposed to high dietary copper, we assessed clinical ...
Interplay between copper and zinc homeostasis through the transcriptional regulator Zur in Enterococcus faecalis.
(2015)
By integrating the microarray expression data and a global E. faecalis transcriptional network we identified a sub-network activated by zinc and copper. Our analyses indicated that the transcriptional response of the ...
Interplay between copper and zinc homeostasis through the transcriptional regulator Zur in Enterococcus faecalis.
(2015)
By integrating microarray expression data and a global E. faecalis transcriptional network we identified a sub-network activated by zinc and copper. Our analyses indicated that the transcriptional response of the bacterium ...
Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage
(Cold Spring Harbor Laboratory Press, 2021-04)
Characterizing transcription start sites is essential for understanding the regulatory mechanisms that control gene expression. Recently, a new bovine genome assembly (ARS-UCD1.2) with high continuity, accuracy, and ...
Deciphering transcriptional regulations coordinating the response to environmental changes
(BioMed Central, 2016)
Background: Gene co-expression evidenced as a response to environmental changes has shown that transcriptional activity is coordinated, which pinpoints the role of transcriptional regulatory networks (TRNs). Nevertheless, ...
Extensive cross-talk and global regulators identified from an analysis of the integrated transcriptional and signaling network in Escherichia coli
(ROYAL SOC CHEMISTRYCAMBRIDGE, 2012)
To understand the regulatory dynamics of transcription factors (TFs) and their interplay with other cellular components we have integrated transcriptional, protein-protein and the allosteric or equivalent interactions which ...