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Genome-Wide Screening and Characterization of Non-Coding RNAs in Coffea canephora
(Mdpi, 2020-09-01)
Coffea canephoragrains are highly traded commodities worldwide. Non-coding RNAs (ncRNAs) are transcriptional products involved in genome regulation, environmental responses, and plant development. There is not an extensive ...
Draft genome sequence and gene annotation of the uropathogenic bacterium Proteus mirabilis Pr2921
(American Society for Microbiology, 2016)
Here, we report the genome sequence of Proteus mirabilis Pr2921, a uropathogenic bacterium that can cause severe complicated urinary tract infections. After gene annotation, we identified two additional copies of ucaA, one ...
Complete chloroplast genome sequence and annotation of the Saccharum hybrid cultivar RB867515
(Genome Announcements, 2017)
Functional annotation and distribution overview of RNA families in 27 Streptococcus agalactiae genomes
(Bmc, 2018-07-28)
Background: Streptococcus agalactiae, also known as Group B Streptococcus (GBS), is a Gram-positive bacterium that colonizes the gastrointestinal and genitourinary tract of humans. This bacterium has also been isolated ...
Complete Genome Sequences of Lactobacillus Phages J-1 and PL-1
(American Society for Microbiology, 2014-01)
Lactobacillus phages J-1 and PL-1 were isolated during the 1960s from abnormal fermentations of Yakult. The genomes are almost identical, but PL-1 has a deletion in the genetic switch region and also differs in a gene ...
TSSFinder—fast and accurate ab initio prediction of the core promoter in eukaryotic genomes
(Oxford University Press, 2021)
K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes
(Wiley, 2021-09)
The annotation of repetitive sequences within plant genomes can help in the interpretation of observed phenotypes. Moreover, repeat masking is required for tasks such as whole-genome alignment, promoter analysis, or pangenome ...
Reference-Guided Draft Genome Assembly, Annotation and SSR Mining Data of the Peruvian Creole Cattle (Bos taurus)
(MDPICH, 2022-11-09)
The Peruvian creole cattle (PCC) is a neglected breed and an essential livestock resource in the Andean region of Peru. To develop a modern breeding program and conservation strategies for the PCC, a better understanding ...