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Molecular characterization of the Hepatitis B virus genotypes in Colombia: A Bayesian inference on the genotype F
(ELSEVIER SCIENCE BV, 2011)
Hepatitis B is a worldwide health problem affecting about 2 billion people and more than 350 million are chronic carriers of the virus. Nine HBV genotypes (A to I) have been described. The geographical distribution of HBV ...
A new method for next-generation sequencing of the full hepatitis b virus genome from a clinical specimen: Impact for virus genotyping
(2020-09-01)
Hepatitis B virus (HBV) is an enveloped virus that induces chronic liver disease. HBV has been classified into eight genotypes (A–H) according to its genome sequence by using Sanger sequencing or reverse hybridization. ...
Isolation and characterization of Acanthamoeba strains from soil samples in Gran Canaria, Canary Islands, Spain
(Springer Verlag, 2014)
Free-living Amoebae of Acanthamoeba genus include non-pathogenic and pathogenic strains that are currently classified in 18 different genotypes, T1–T18. In this study, a survey was carried out to evaluate the presence of ...
A new genotype of bovine leukemia virus in South America identified by NGS-based whole genome sequencing and molecular evolutionary genetic analysis
(BioMed Central, 2016-01)
Background: Bovine leukemia virus (BLV) is a member of retroviridae family, together with human T cell leukemia virus types 1 and 2 (HTLV-1 and -2) belonging to the genes deltaretrovirus, and infects cattle worldwide. ...
Complete replacement of the mitochondrial genotype in a Bos indicus calf reconstructed by nuclear transfer to a bos taurus oocyte
(2001-05-22)
Due to the exclusively maternal inheritance of mitochondria, mitochondrial genotypes can be coupled to a particular nuclear genotype by continuous mating of founder females and their female offspring to males of the desired ...
Analysis and comparison of the STR genotypes called with HipSTR, STRait Razor and toaSTR by using next generation sequencing data in a Brazilian population sample
(2022-05-01)
Short tandem repeats (STRs) are particularly difficult to genotype with rapid evolving next-generation sequencing (NGS) technology. Long amplicons containing repetitive sequences result in alignment and genotyping errors. ...
Screening of genomic libraries
(2013-05-10)
Microsatellites, or simple sequence repeats (SSRs), have proven to be an important molecular marker in plant genetics and breeding research. The main strategies to obtain these markers can be through genomic DNA and from ...
Update of genetic diversity of porcine circovirus type 2 in Chile evidences the emergence of PCV2d genotype
(Frontiers Media, 2021)
Porcine Circovirus 2 (PCV2) can cause multiple clinical conditions known as porcine
circovirus-associated diseases (PCVAD). Before the wide availability of PCV2 vaccines,
PCVAD resulted in significant losses to the global ...
Hibridização reversa e sequenciamento na genotipagem do vírus da hepatite C
(Sociedade Brasileira de Medicina Tropical - SBMT, 2010-04-01)
INTRODUÇÃO: Os métodos de genotipagem do vírus da hepatite C têm sido muito discutidos. O objetivo deste trabalho foi comparar as metodologias de hibridização reversa e sequenciamento direto para a genotipagem do vírus da ...