Now showing items 1-10 of 1278
Codon usage and codon context bias in xanthophyllomyces dendrorhous
Background: Synonymous codons are used differentially in organisms from the three domains of life, a phenomenon referred to as codon usage bias. In addition, codon pair bias, particularly in the 3' codon context, has also ...
Codon usage and codon context bias in Xanthophyllomyces dendrorhous
(BioMed Central, 2015)
Background Synonymous codons are used differentially in organisms from the three domains of life, a phenomenon referred to as codon usage bias. In addition, codon pair bias, particularly in the 3’ codon context, has also ...
Avian coronavirus Spike Glycoprotein Ectodomain Shows a Low Codon Adaptation to Gallus gallus with Virus-Exclusive Codons in Strategic Amino Acids Positions
(SPRINGERNEW YORK, 2012)
This is a study on the Avian coronavirus IBV and chicken host-relationship from the codon usage point of view based on fifty-nine non-redundant IBV S1 sequences (nt 1-507) from strains detected worldwide and chicken ...
Differential bicodon usage in lowly and highly abundant proteins
Degeneracy in the genetic code implies that different codons can encode the same amino acid. Usage preference of synonymous codons has been observed in all domains of life. There is much evidence suggesting that this bias ...
Metabolic specialization and codon preference of lignocellulolytic genes in the white rot basidiomycete ceriporiopsis subvermispora
(MDPI AG, 2020-10-20)
Ceriporiopsis subvermispora is a white-rot fungus with a high specificity towards lignin mineralization when colonizing dead wood or lignocellulosic compounds. Its lignocellulose degrading system is formed by cellulose ...
SARS-CoV-2 Codon Usage Bias Downregulates Host Expressed Genes With Similar Codon Usage
(Frontiers Media S.A., 2020-08)
Severe acute respiratory syndrome has spread quickly throughout the world and was declared a pandemic by the World Health Organization (WHO). The pathogenic agent is a new coronavirus (SARS-CoV-2) that infects pulmonary ...
Análise dos padrões de utilização de códons sinônimos no genoma da bactéria Chromobacterium violaceum
(Universidade Federal de Pernambuco, 2014)
Whole genome analysis of codon usage in Echinococcus
(Elsevier Science, 2018-10)
The species of the genus Echinococcus are parasitic platyhelminths that cause echinococcosis and exert a global burden on public and animal health. Here we performed codon usage bias and comparative genomic analyses using ...
A first case of protease codon 35 amino acid insertion in a HIV-1 subtype B sequence detected in the Bauru region, state of São Paulo, Brazil: case report
(Sociedade Brasileira de Medicina Tropical - SBMT, 2011-06-01)
Inserções de aminoácidos na protease têm sido raramente descritas em pacientes infectados pelo HIV. Uma destas inserções foi, recentemente, descrita no codon 35, embora seu impacto na resistência mantém-se pouco conhecido. ...