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De Bruijn sequences and De Bruijn graphs for a general language
(2005)
A de Bruijn sequence over a finite alphabet of span n is a cyclic string such that all words of length n appear exactly once as
factors of this sequence. We extend this definition to a subset of words of length n, ...
Isolation and nucleotide sequence of the Thiobacillus ferrooxidans genes for the small and large subunits of ribulose 1,5-bisphosphate carboxylase/oxygenase
(1991)
The genes encoding for the large (rbcL) and small (rbcS) subunits of ribulose-1,5-bisphosphate carboxylase (RuBisCO) were cloned from the obligate autotroph Thiobacillus ferrooxidans, a bacterium involved in the bioleaching ...
Compact representations of event sequences
(Institute of Electrical and Electronics Engineers Inc., 2018)
We introduce a new technique for the efficient management of large sequences of multi-dimensional data, which takes advantage of regularities that arise in real-world datasets and supports different types of aggregation ...
Mining sequences in activities for time use analysis
(IOS Press, 2020)
By providing a complete record of time use for a given population, time use studies enable investigators to test various hypotheses concerning that behavior. However, the large number and variety of activity combinations ...
Efficient Fully-Compressed Sequence Representations
(Springer, 2012)
We present a data structure that stores a sequence s[1..n] over alphabet
[1..σ ] in nH0(s) + o(n)(H0(s)+1) bits, where H0(s) is the zero-order entropy
of s. This structure supports the queries access, rank and select, ...
On the Characterization of l(p)-Compressible Ergodic Sequences
(IEEE-INST Electrical Electronics Engineers, 2015)
This work offers a necessary and sufficient condition for a stationary and ergodic process to be l(p)-compressible in the sense proposed by Amini, Unser and Marvasti ["Compressibility of deterministic and random infinity ...
Genetic divergence of tomato ringspot virus
(Springer, 2016)
Tomato ringspot virus (ToRSV) has been detected in Chile, causing economically important diseases in a wide range of hosts. A ToRSV isolate was obtained from raspberry cv Heritage (Rasp-CL) showing leaf yellowing and ...
Outbreak of Vibrio parahaemolyticus Sequence Type 120, Peru, 2009
(Centers Disease Control, 2016)
In 2009, an outbreak of Vibrio parahaemolyticus occurred in Piura, Cajamarca, Lambayeque, and Lima, Peru. Whole-genome sequencing of clinical and environmental samples from the outbreak revealed a new V. parahaemolyticus ...
Complete genome sequence of the bioleaching bacterium Leptospirillum sp group II strain CF-1
(ELSEVIER SCIENCE BV., 2016)
We describe the complete genome sequence of Leptospirillum sp. group II strain CF-1, an acidophilic bioleaching bacterium isolated from an acid mine drainage (AMD). This work provides data to gain insights about adaptive ...
Molecular cloning and sequence determination of a cDNA coding for the α-subunit of a Go-type protein of Xenopus laevis oocytes
(1989)
Xenopus laevis oocytes are cells ideally suited to the study of signal transduction and of the G-proteins that are involved in this process. A X. laevis cDNA library in λgt10 has been screened with a mixture of three ...