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Comparative clinical sample preparation of DNA and RNA viral nucleic acids for a commercial deep sequencing system (Illumina MiSeq (R))
(Elsevier B.V., 2015-08-01)
Sequence-independent methods for viral discovery have been widely used for whole genome sequencing of viruses. Different protocols for viral enrichment, library preparation and sequencing have increasingly been more available ...
Microsatellite markers for Bokermannohyla species (Anura, Hylidae) from the Brazilian Cerrado and Atlantic Forest domains
(Brill Academic Publishers, 2014-01-01)
We characterized 22 polymorphic microsatellite markers for the Brazilian treefrog Bokermannohyla ibitiguara and tested their cross-amplification in B. alvarengai, B. circumdata and B. hylax. Our focal species occurs in ...
Bacterioplankton composition in tropical high elevation lakes of the Andean plateau
(Oxford University Press, 2018)
High-elevation lakes in the tropics are subject to extreme environmental fluctuations and microbes may harbor a unique genomic repertoire, but their composition and diversity are largely unknown. Here, we compared the ...
Bacterioplankton composition in tropical high-elevation lakes of the Andean plateau
(Oxford University Press, 2018)
© FEMS 2018. High-elevation lakes in the tropics are subject to extreme environmental fluctuations and microbes may harbor a unique genomic repertoire, but their composition and diversity are largely unknown. Here, we ...
Bioconversion of crude glycerol from waste cooking oils into hydrogen by sub-tropical mixed and pure cultures
(2018-01-01)
This study compared the biohydrogen generation by sub-tropical mixed and pure cultures from the crude glycerol from the biodiesel production using waste cooking oils (WCO). The crude glycerol was pretreated by pH adjustment. ...
The Streptomyces leeuwenhoekii genome: de novo sequencing and assembly in single contigs of the chromosome, circular plasmid pSLE1 and linear plasmid pSLE2
(BioMed Central, 2015)
Background: Next Generation DNA Sequencing (NGS) and genome mining of actinomycetes and other microorganisms is currently one of the most promising strategies for the discovery of novel bioactive natural products, potentially ...
Illumina MiSeq Phylogenetic amplicon sequencing shows a large reduction of an uncharacterised Succinivibrionaceae and an increase of the Methanobrevibacter Gottschalkii clade in feed restricted cattle
(Public Library Of Science, 2015-07)
Periodic feed restriction is used in cattle production to reduce feed costs. When normal feed levels are resumed, cattle catch up to a normal weight by an acceleration of normal growth rate, known as compensatory growth, ...
Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
(Public Library Science, 2019-10-03)
Lutzomyia longipalpis is the main vector of Leishmania infantum, the causative agent of visceral leishmaniasis in the Neotropical realm. Its taxonomic status has been widely discussed once it encompasses a complex of ...
Complete Genome Sequence of an Avian Metapneumovirus Subtype A Strain Isolated from Chicken (Gallus gallus) in Brazil
(Amer Soc Microbiology, 2017-07-01)
We report here the complete genome sequence of an avian meta-pneumovirus (aMPV) isolated from a tracheal tissue sample of a commercial layer flock. The complete genome sequence of aMPV-A/chicken/Brazil-SP/669/2003 was ...