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Amplicon sequencing reveals complex infection in infants congenitally infected with Trypanosoma cruzi and informs the dynamics of parasite transmission.
(Oxford University Press, 2023)
Congenital transmission of Trypanosoma cruzi is an important source of new Chagas infections worldwide. The mechanisms of congenital transmission remain poorly understood, but there is evidence that parasite factors are ...
Data analysis for 16S microbial profiling from different benchtop sequencing platforms
(Journal of Microbiological Methods, 2018)
Amplicon metagenomic analysis of fungi from Antarctic Terrestrial habitats
(Frontiers Media, 2017)
In cold environments such as polar regions, microorganisms play important ecological roles, and most of our knowledge about them comes from studies of cultivable microorganisms. Metagenomic technologies are powerful tools ...
Deep sequencing to detect diversity of Trypanosoma cruzi infection in patients co-infected with HIV and Chagas disease
(Oxford University Press, 2021)
Chagas disease, caused by Trypanosoma cruzi, can reactivate and cause severe acute disease in immunocompromised patients such as those infected with HIV. We conducted amplicon deep sequencing of a 327-base pair fragment ...
Amplicon-metagenomic analysis of fungi from antarctic terrestrial habitats
(Frontiers Media S.A., 2017)
© 2017 Baeza, Barahona, Alcaíno and Cifuentes. In cold environments such as polar regions, microorganisms play important ecological roles, and most of our knowledge about them comes from studies of cultivable microorganisms. ...
Multiplex Amplicon Sequencing For Microbe Identification In Community-based Culture Collections
(Nature Publishing Group, 2016)
Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale
(Oxford University Press, 2019)
BACKGROUND: In light of the current biodiversity crisis, DNA barcoding is developing into an essential tool to quantify state shifts in global ecosystems. Current barcoding protocols often rely on short amplicon sequences, ...
The fecal microbiota of wild and captive raptors
(Bmc, 2020-05-06)
Background The microorganisms populating the gastro-intestinal tract of vertebrates, collectively known as microbiota, play an essential role in digestion and are important in regulating the immune response. Whereas the ...